Ictalurus punctatus (channel catfish): 108280990
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Entry
108280990 CDS
T04658
Symbol
csf1a
Name
(RefSeq) macrophage colony-stimulating factor 1a
KO
K05453
macrophage colony-stimulating factor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108280990 (csf1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108280990 (csf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ipu04052
]
108280990 (csf1a)
Cytokines and neuropeptides [BR:
ipu04052
]
Cytokines
CSF and other factors
108280990 (csf1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSF-1
Motif
Other DBs
NCBI-GeneID:
108280990
NCBI-ProteinID:
XP_017351995
UniProt:
A0A2D0TBC7
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All DBs
Position
21:complement(12809801..12850728)
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AA seq
251 aa
AA seq
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MNTHTTAHKAKIRHLCSCLVLCLHLASGAVPGPCVHSVTEEHLLILRKLIINQVQNGCSI
TYRFTKRQNLSEVCYIKAAFPHILDLLNTHFTYEKGSDNYRYTSSLKDLIYNIYSEKCIP
PINEELEESPVQFARLYISLPREGLQKAEEVFQMYKRLMSKTDKPVNWNCEDEYANNFPE
STTALHTQTTGTPECQCSCRHPLKSFMLTRSIPTASPASPHTKSGAYIFRNKNEGSRAPE
PAVKDEAPNSV
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacacacaacagcccacaaggccaagataaggcatctgtgctcctgccttgtc
ctgtgcttgcacttggcctctggtgctgtacctggtccatgtgtacattctgtgactgag
gaacatctcctgattttaagaaaactgattataaaccaagtccaaaatggctgctctata
acctataggtttaccaaacgccagaacctgagtgaagtctgttacattaaagcagcattc
cctcacatcctggaccttttgaacacacacttcacatatgaaaaaggttctgataactat
cgctacacaagctcactaaaggacttgatctacaacatttattctgagaaatgcatccct
cctatcaacgaagaacttgaggaaagtccagtgcagtttgcaagactgtacatatctttg
cccagggagggtctacaaaaagcagaggaggtatttcagatgtacaaaaggctgatgagt
aaaactgacaaacctgtgaactggaactgtgaggatgaatatgcaaataactttccagaa
tccaccactgcacttcacacccaaacgacaggtaccccagagtgccagtgctcttgccgt
caccctctgaagtcatttatgttaaccagatctattccaactgcatcacctgcatctccc
cacaccaaatcaggtgcatatatcttcaggaacaagaatgaaggatctagagcacctgaa
cctgcagtcaaagatgaagcaccaaactcagtttag
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