Ictalurus punctatus (channel catfish): 108281039 Help Entry 108281039         CDS       T04658                                  Name (RefSeq) rootletin isoform X1   KO K16469   rootletin Organism ipu  Ictalurus punctatus (channel catfish) Brite KEGG Orthology (KO) [BR:ipu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:ipu03037]     108281039 Cilium and associated proteins [BR:ipu03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    108281039 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rootletin ATG16 Laminin_II Relaxase_C Motif Other DBs NCBI-GeneID:  108281039 NCBI-ProteinID:  XP_053530166 UniProt:  A0A9F7QWF3 LinkDB All DBs Position 21:20805882..20836251 Genome browser AA seq 2024 aa AA seqDB search MSAPESPRADSRLEQVIQKLEESVLSEEKRLTVRGPSPDAPPTCIPARVREIVTKNLNES ISAAGSMSSVLSLEEENRVLQSELSRLEDLLAHSRADRDELAIKYSAISERLEQALRLEV GVSDSDSPECVSLSQQVVELRRRLDEEQNAYKRKLTAYQEGQQRQAQLVQKLQAKVLQYK KKCSDLEQSLLEKSSEQSGCEKSTNGQDECSSELETTLIRLEEEQQRSSSLSAVNAMLRE QLEQAGLANEALSQDIRRLTADWTKAREELEQKESDWRREEESFHNYFSSEHSRLLTLWR QVVSFRRSVCEMKSATERDLSVMRSDLAQTAQSVQLQCVCVCVAVRSREDGSTLVLEREA AQRVTLEQLLREKESEITESQSEREKLNNRLADADREMQRIRARVDERENEITSLTRRLQ EQSGDEESELQTLRAHTNTLLDTLRDIAQSMLSDSDSSVLGSSVEADSENSVLALLPLMR SSSPHPSSSPQRSSSPRRPSALTLPESALSSLRAMATNRQLQLQELKGRLLSAQSSVQQL RKQQGEAESCRREAELRLQTVQGERDDAQRERETAARERDRLRQERDKLCSEKECVQQSV QALQTKLQLLQMDCERLQQAVASAQRERDHERVERETAVQERDRARVETERVQSQWGQSE SRCSCLRSELAAMKESLQQGEIERQLLKTEKSQLTDTLSKAESSNAELMVLMAKLRSEEA SLRDSLAKMSSLNEGLAQDKAELNTIIIQLEEERSVLQGQKREAEQEKLTIRDELVRLEQ DRLELDSAHLTLHQSLQESEQARAGLEAELQMLRMDRQKLQEKVTQLCGEVSSLGAELGI IRGEGERRGVALEEAGRTRAELARERAGLVVQLTASERDNVALTEELAAFRVEREALEAS LFEVQQQLMQSDLRREQLENENLNLRARHDNTAAELKRVRADGEMAAAQSERERQALKQE MINAQHEAQLSLRNALSDHQEELERLSSDKEALRCSLQAEQEEALRRMREEMEERLQKTE REREELQEEIRALQRTRDQSLLQAESDKQQALSLKETEKAMLSERVCSLQAELSSANLEL ERLTRETQHLKEQERAAVGAVNTELQELRLQLEDTVSSNRRELRRLQENCTEEQIRADNA LRELEECRALLSASEESRDATRRDLLEMDRRLSHSRDTGEGHRRDTADLRRSLGDVTKEK EALDQSNGQLREALRAAESERISVKRQCEEKEQRVAVLEETLASAQKEVGDLRSCLREVE RSRLEARRELQELRRQVKVVDVEREQKAREVAELQTRLSLEEQKEEERGKELFSIKQKLT EAEAARNSLRKELSCVQKRLSDGESSRRGLERDLSSQLQEARGSEKKLQDELRNLSLRAH AEVEASTQTQLQLSEAQGRLNATEAELTRSEAARRDLEFRLASLQSALTRTLGIGAGGRS LRGRSPAGSAHSSLISVAMPRRRSVSPLRGSLSPPKDVADKSTKSSPDNTTVSCPLSPER GDTPIPLIQPDLDPETLRSGLRDFLQELREAQRERDEARSQLGELRQELEEMKGERDSVQ NRVTQLHTTLQECQEGKRNVDGRLNSTQALLQQHEEAVRRGEREKRTLAERVKELERTLQ NAEMERRHLQEQCSKLRAGEVRLEAERRKLREALEGAESRATRVELGRRSLEGEIQRLRV CLAEKETEAQSVQDRHDSMLKQVLEAEVRVTSLQREVDRLSSLLSKAQDLESVQRDRAQS LSQSLQDINAAHSATQGRLTTLQKNLTLTEQERKQLQERVDSMRASLSEGKHAVETLTER MQNLKAELTQSQLRRQELETELADTQEALRLRSAALCEAQRSLQTAQTERVCVEERVCVL QRAVALLETEKKDAERQAVRLEKDKNALRNTLEKVERQKLKSEESSMRLCAEKERLDQSL STTEQELQHAQRQISLLQTQLAELEASQSVSEREDALKEAELLRANQREVERLRASQREA ERTLANRERAHRQRVKGLEEQVSTLKEQFQHELRRRHPSLPLSN NT seq 6075 nt NT seq  +upstreamnt  +downstreamnt atgagcgcaccggaaagcccgcgcgcagactccagactggagcaggtcatccagaagttg gaggagagtgtgttatctgaagagaagaggttgacagtgcgaggcccctcccctgatgcc ccgcccacctgcataccggctcgtgtgcgagaaatcgtgaccaagaacctaaacgagagc atctcagcagccggcagcatgtcctcggttctgtccctggaggaggagaaccgcgtcctt cagagtgaactgagtcgcctcgaggacctgctggcccacagccgcgccgaccgcgacgag ctcgccatcaaatacagcgccatcagtgagaggttggagcaggccctgcgtttggaggtg ggggtcagtgacagcgactctccggagtgtgtgagtttgtctcagcaggtggtggagctg cgacggcgtctggatgaagaacaaaacgcttacaagcgcaaactcaccgcctaccaggag gggcagcagagacaagcgcaactggttcagaaactacaggccaaggttctgcagtataag aagaagtgcagtgatctggagcagtctctcctggagaaatcatcagagcagagtgggtgt gaaaagtccactaacggtcaggatgagtgcagcagtgagctggagacgacccttatccgc ctggaggaagagcagcagaggagcagcagtctttcggcggtgaacgcgatgctgcgtgaa cagctggaacaggccggactggccaatgaggcactgagtcaggacatccgcaggctcact gctgattggaccaaagcgagggaggagctggagcagaaggagtctgattggaggagagag gaggagtcgttccataactacttcagcagtgagcacagtcggctgctgactctgtggagg caggtggtcagtttccgcaggagtgtgtgtgagatgaagagtgccaccgagagggatctg tcagtgatgcgcagcgatctggcgcagacggcgcagagcgtgcagctgcagtgtgtgtgc gtgtgtgtggcggtgcggagtcgcgaggacggctcgacgctggtgctggagcgagaggcg gctcagcgcgtcacactggagcagctgctccgagagaaagagagcgagatcaccgagagc caatcagagagagagaaactcaacaacaggctggcagacgcagacagagagatgcagaga atcagagctcgagtagacgagagagagaacgagatcacgtcactcacacggagactgcag gagcagagcggggatgaagagtcggagctccaaacactcagagctcacactaacactctg ctggacacactgagagacatcgcacagtcgatgttgtcagattccgactcgagtgtgttg ggctcgtcggtggaggccgattcagagaacagtgttttggctctgctgccgttgatgcgc tcctcctccccccatccatcctcatcaccacagcgatcgtcgtctccacggcgaccctcc gccctgaccctccccgaatccgctctctcatctctgcgtgccatggcaaccaatagacag ctacaactccaggagctcaaaggtcgtctgctgtcagcgcagtcgtctgtccaacagctg cgcaaacagcagggggaggcagagtcatgcaggagggaggcggagctacgtctgcagact gtgcagggcgagagggatgatgctcagagagagagagagacggcggcgagagagagagac cgactccgacaggagagagacaaactctgcagtgagaaggagtgtgttcagcagtctgtg caggctttgcagacaaaattgcagctgctacagatggattgtgagagactgcagcaggct gtagcgtctgcgcagagagagagagatcacgaacgagtggagagagagacggctgtgcag gagagagatcgcgccagagtggagaccgagagagttcagtctcagtggggtcagagtgag agtcgctgcagctgtctgcgttctgaactggctgcaatgaaggagtcactccagcagggg gagatagagagacaactgctcaaaacggagaagagccaactgactgacactctcagtaag gcggagtccagtaatgctgagctgatggtgctgatggcgaagctgcggtctgaggaggcg tcactgcgagactctctggctaaaatgagcagcttaaacgagggacttgctcaggacaaa gcagaactaaacaccatcatcatccagctggaggaggagaggagtgtgctgcagggtcag aagagagaggcggagcaggagaagctgaccatcagagatgagcttgtccgattggagcag gaccgactggaactggactccgcccacctcactctccaccaatcactgcaggagtctgag caggccagggcgggcctggaggcggagcttcagatgctccggatggacagacaaaaactg caggagaaagttacacagctgtgtggtgaggtgagctctttgggggcggaacttggcatc atacgtggcgagggggagagaaggggtgtggctctggaggaagccgggcggactagggcg gagcttgctcgtgagagggcggggcttgtggttcaactcacggcgtctgagagagataac gtcgcactgacggaggagctcgcagcgttcagggtggagagggaggcactggaggcgagt ctgttcgaggtgcagcagcagctgatgcagtcagacttgcgccgagagcaacttgagaac gaaaacctcaacctgagagcacgacatgataacactgcagcggaactgaagcgtgtgcgt gcggatggagaaatggctgccgctcagagtgagcgagagaggcaggctcttaaacaggag atgattaacgctcagcatgaggctcagctctctctccgtaatgcactgtctgaccaccag gaggagctggagaggctctccagcgacaaggaggctctacgctgcagtctgcaggccgag caggaggaggcgctgcggcgcatgagggaggaaatggaggagcgtctgcagaagacggag cgagagcgggaggagctgcaggaggagatccgggctttgcagcgcacacgggatcagagt ctcctacaggccgagagcgacaagcagcaggctctgtccctgaaggagacggagaaggcc atgctgtccgagagagtgtgttccctacaggccgagctgagctctgcaaacctggagctg gaaagactgacaagggaaacacaacacctgaaggagcaggagagggctgcagtaggagct gtgaacactgagctgcaggagctgcgtctgcagctggaggacacggtgagctctaacaga agggagctgcgcagacttcaggagaactgcacagaggagcagatacgtgctgacaatgca ctccgagagctggaggagtgtcgcgctcttctctcagccagcgaggagagccgagatgcc acgagacgagaccttctggagatggacaggcgtctgagccactcacgcgacacgggggag gggcatcggcgagacacggcggacctacggcgctcccttggcgatgtcacgaaagagaag gaggctctcgaccaatcgaacggccagctgagggaggcgctgagagcagcggagagcgaa cggatcagtgtgaagcgtcagtgtgaggagaaagagcagcgcgtggctgtactggaggaa accctagcgtctgcgcagaaggaagtgggggatctgcgcagctgtctgcgggaggtggag cgatcacgactggaggccaggagagaactgcaggaactgcgcagacaggtgaaggtggtg gatgtagagcgagagcagaaagccagagaagtggctgagctccagactcgtctctcgctg gaggagcagaaggaggaggaacgagggaaggagctcttctccatcaaacagaagctcact gaggcggaggctgccaggaactccctcagaaaagagctgtcgtgtgtgcagaagcgtctg agcgacggtgagagcagtcggcgtggactggagcgggatttgagctctcagctgcaggag gcgcgcggctccgagaagaagctgcaggacgagttgaggaacctgagcctgagagcgcat gccgaggtcgaggcgtccacgcagacgcagctgcagctcagcgaggcgcaagggcgcctc aacgccacggaggcggagctgacacgttccgaggccgcacgccgtgacctcgagttccga ctggctagtttgcagtcggcgttgacacggacgctgggtatcggcgccggggggcggagc ttacgtggacgcagccctgcaggctctgcccactcctcactcatttctgtcgcgatgccc cgccgccggagcgtctctcctctacgcggctcattatcgccccctaaagatgttgcggat aaatccactaagtccagtcctgataacacgaccgtgtcctgtcccctgtcccctgagaga ggagacacgcccatccctctcatacagcccgacctcgacccggaaacactccgcagtggc cttcgagacttcctgcaagagctcagagaagcccagagagaaagggatgaggcacgcagc cagttgggggagctacggcaagaactagaggaaatgaaaggagagagggactctgttcaa aatcgcgtcactcagctacacaccacactgcaagagtgtcaggaaggtaagcggaatgtg gacggtcgtctgaactccactcaggcgttactgcagcagcatgaggaggcggtgaggaga ggagagagagagaagagaacactcgctgaacgagttaaagagctcgagagaacactgcag aacgccgagatggaacgcagacacctacaggagcagtgcagtaaactccgggcaggtgag gttcggttggaggcagagcgtcggaagctgagggaggccttagaaggggcggagtcccga gctacaagggtggagcttggaaggcggagcctcgagggagaaatccaacggctacgagtg tgtctcgccgagaaagagacagaagcccagagtgttcaggaccgacatgacagcatgctc aaacaggtgctggaggccgaggtgcgtgtcacctcattacagagggaggtggacagattg tcgtctctgctcagtaaagctcaggatttggagagtgttcaaagagacagagcgcagagc ctcagccagagcctgcaggacatcaacgcagctcacagcgccacccaggggcgactcacc acactgcagaaaaacctcacactcactgagcaggaacgcaaacaactgcaggagcgtgtg gacagcatgcgggcgtctctgtctgaggggaaacacgctgtggagacgctgactgagcgc atgcagaacctgaaggctgaactcacacagagccaactcagacgccaagagctggagaca gagcttgctgacacacaggaggccttgcgtctgcgctcggccgctctgtgcgaggcacag cgttctctgcagacggcgcagacggagcgcgtgtgtgtggaggagcgagtgtgtgtcctg cagcgagccgtggctctgttggagacagaaaagaaagatgcagagagacaggcggtgcgt ctggagaaggacaagaacgcgctgaggaacacactggagaaggtggagcgtcagaagctg aagtcggaggagagcagcatgcgtctgtgcgcggagaaagaacgactggatcagtcactc agcacaacggagcaggaactacaacacgcacagagacagatctccctgctgcagacccaa ctcgccgagttggaggcgtcacagagtgtgagtgagcgggaagacgccctgaaggaggcg gagcttctgagagccaatcagcgcgaggtggagcgactgagagccagtcagagagaggca gagcgaacgttggccaatcgggagagagctcaccgtcagagagtgaagggactggaagag caggtgtccactctgaaggagcagttccagcacgagttacggcgccgacacccgtctctg cccctgagcaactga

DBGET integrated database retrieval system