Ictalurus punctatus (channel catfish): 108281043
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Entry
108281043 CDS
T04658
Symbol
cacna1da
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1D subunit, a isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04020
Calcium signaling pathway
ipu04218
Cellular senescence
ipu04260
Cardiac muscle contraction
ipu04261
Adrenergic signaling in cardiomyocytes
ipu04270
Vascular smooth muscle contraction
ipu04530
Tight junction
ipu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108281043 (cacna1da)
04020 Calcium signaling pathway
108281043 (cacna1da)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
108281043 (cacna1da)
09144 Cellular community - eukaryotes
04530 Tight junction
108281043 (cacna1da)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
108281043 (cacna1da)
09153 Circulatory system
04260 Cardiac muscle contraction
108281043 (cacna1da)
04261 Adrenergic signaling in cardiomyocytes
108281043 (cacna1da)
04270 Vascular smooth muscle contraction
108281043 (cacna1da)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108281043 (cacna1da)
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108281043 (cacna1da)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
KOKOPELLI
Motif
Other DBs
NCBI-GeneID:
108281043
NCBI-ProteinID:
XP_053529885
Ensembl:
ENSIPUG00000020039
UniProt:
A0A9F7QU23
LinkDB
All DBs
Position
21:complement(19861207..19946128)
Genome browser
AA seq
1945 aa
AA seq
DB search
MHQNAYVRNGWNMLDFVIVVIGLFSVTLEVLTKEGGQQAVGSPAPSSHGHGGKPGGFDVK
ALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFLGKM
HATCYVVGTAYIAGDESAPCAVNGHGRTCILNGTECKEGWHGPNGGITNFDNFLFAMLTV
FQCITMEGWTDVLYWMNDAMGIELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAK
ARGDFQKLREKQQMEEDLQGYLDWITQAEDIDPDNEDEEDGGKHNRVTLADIMNKKKKGL
GWFSHSSDTHASVPGSDTESVNTEKDEEKCCDPLCKKISKSKFSRRWRRWNRFCRRKCRL
AVKSVPFYWLVIILVFLNTLTISSEHYNQPDWLTEVQGVANKVLLGMFTSEMLVKMYSLG
LQAYFVSLFNRFDCFVVCGGIIETILVELDIMSPLGISVLRCVRLLRIFKVTRHWASLSN
LVASLLNSLKSIASLLLLLFLFIIIFALLGMQVFGGKFNFDDIHKKRSSFDNFPQAMLTV
FQILTGEDWNQVMYDGIMAYGGPSSSGMIVCLYFIILFVCGNYILLNVFLAIAVDNLAGS
GSLSSKKRTDVRLDDDEEDFKVPVEDEKENAEEEEEEGEAPSGPRPTIAELLKKEKVIPI
PEGTAFFIFSKTNPLRVLCHKIINHHLFTNLILVFIMLSSVSLAAEDPIRNHSFRNIVLG
YADYVFTSLFTFEIVLKMMTFGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVV
KILRVLRVLRPLRAINRAKGLKNVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGK
FYRCNDEAKLSPDECKGIFILYKDGDMNHPTIQKRHWHNSEFNFDNVLMAMMALFTMSTF
EGWPALLYKAIDSNKENFGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGE
KEYQNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSTAFEYIMFVLIMLNTI
CLAVQHYGQSKTFSYVMDILNMVFTAVFTVEMVLKLIAFKPRHYFTDAWNTFDALIVVGS
VVDIAITEANPAEGEELVNVEENARISITFFRLFRVMRLVKLLNRGEGIRTLLWTFIKSF
QALPYVALLIAMLFFIYAVIGMQIFGKIAMVEGTQINRNNNFQTFPQAVLLLFRCATGEA
WQEIMLACLSGKLCDPESDYNPGEEMTCGSGFAIVYFITFYMLCAFLIINLFVAVIMDNF
DYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVA
CKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTDGNLEQANEELRAVIKKIWKRTSMK
LLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEEGLVGVHPTQNNTAITLQAGLRT
LHDIGPEIRRAISCDLQDEELVDFIPEEDEEIYRRNGGLFGNHINHINGDPHRGSGHQTN
ATQRPLQVHPPPHYADMEQPVGRLDRANAMAQHNHHHHHHHHHNHHNSYSKSPKSTNINL
NNANMSSLPNGGHNRYYQHAPANGYTGPYYPGEYEKPRTPNGQRRRYYETYIRPRGSIRR
QPTIRREEDFDEDRYSGEYYSGEEFYEEDGMLSGDRYPSSDQEYETPRGYHHPDSYYDDD
EQPLYHDSYRSPKRRQLPPTPQGNRRPSFNFECLRRQSSQDELPRQRTALPLHLMQHQVM
AVAGLDWSRAHRLSPSRSTRSWATPPATPASKDRTPYYTPMIRVDRPHRDSMGGSYCSVR
KSSWYTDDPEYQQSTYSPVHLKIPPEYRKQYHQKRGSATSLVEAVLISEGLGRYAKDPKF
VAATKHEIADACDMTIDEMESAASHLLNGGVMPGVNGVNVYPVMTQIEYDVQDVSANYSD
EEPEADSRPRYEEDLADEMICITTL
NT seq
5838 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagaacgcgtacgtcaggaacggctggaacatgctggatttcgtcatcgtcgtg
atcggactgttcagtgttaccctagaagttctgaccaaagaagggggtcagcaggcagta
ggaagccccgccccctcctcacacggccatggaggcaaaccgggaggcttcgacgtcaaa
gcgctgcgagccttcagggttctgcgaccccttcgcctggtctcaggagtacctagttta
caggtagtgttgaactccatcattaaagccatggttcctcttctccacattgctctgctg
gtcctcttcgtcatcatcatctacgccatcatcggccttgagctcttcctcggaaaaatg
cacgcaacctgctacgtagtcgggacagcttatatagcgggggacgagtcggctccctgc
gcggtaaacggacacggccgtacctgcatcctgaacggtacggagtgcaaagaaggctgg
cacggccccaacggcggcatcaccaacttcgacaacttcctgttcgccatgctgaccgtg
ttccagtgcatcactatggagggctggacagatgtgctgtactggatgaatgatgcgatg
gggatagagctgccctgggtctactttgtgagcttggtcatcttcggctctttcttcgtc
ctgaaccttgttctgggagtgttgagtggtgagttctctaaggagcgagagaaggcgaag
gctcgtggagatttccagaagctccgtgagaagcagcagatggaggaggacctgcagggc
tacctggactggatcacgcaggccgaggacatcgaccctgacaacgaggatgaggaagat
gggggcaaacacaaccgggtcacgctcgctgacatcatgaacaagaagaagaaagggtta
ggctggttcagtcactcttctgacactcacgcgagtgttccggggagcgatactgaatct
gtcaacacggagaaagatgaagagaaatgctgtgaccctctgtgtaagaaaatctccaag
tccaagttcagtcggcgctggcgtcgctggaacaggttctgccgcaggaagtgccgcttg
gccgtgaaatctgtgccgttttattggctggtgatcattctggtgttcctcaatacgctc
accatttcatcagaacactacaaccaaccggactggctcacagaagtgcagggggtggcc
aataaggtgctgctggggatgttcacgtcggagatgctggtgaagatgtacagtctgggt
ctgcaggcctactttgtgtcgctctttaaccgttttgactgctttgtcgtatgcggcgga
atcatagagacgatcctagtggaacttgatatcatgtctccactcggcatctccgtgctc
cgctgtgtacgactcctgaggatctttaaggtcacacgtcactgggcgtctctcagtaac
ctggtggcatctctgctgaactcgctgaagtccatcgcctcgctgctgctcctgctcttc
ctcttcatcatcatcttcgctctgctcgggatgcaggtgttcggcggcaagttcaacttc
gacgacatacacaaaaagcggagcagcttcgacaacttcccccaggccatgctgacggtc
tttcagattctgaccggtgaagactggaaccaggtgatgtacgatggcatcatggcgtac
ggcggcccttcatcgtcggggatgatcgtatgcctttacttcatcatcctctttgtctgt
ggaaactacatcctgctgaacgtgttcttggccatcgccgtggacaacctggcgggcagt
ggttcgctcagttctaagaagagaactgatgtcaggctagatgatgacgaagaagatttc
aaggttccagttgaagatgagaaggagaatgcagaagaggaggaggaagaaggggaggct
ccatcagggcctcgtcccaccattgcagagctgttgaagaaagagaaggtcataccgata
ccagaaggcaccgccttcttcatattcagcaaaacgaacccgcttcgtgttttgtgccac
aagataataaaccaccacctcttcaccaacctcatcctcgtcttcataatgctcagctcg
gtctccctcgccgccgaggatccaatcagaaaccactctttccgcaatattgtcctaggc
tatgcagattatgtcttcactagtctgtttacatttgagattgttttgaagatgatgaca
ttcggagcgtttctccacaagggggcgttctgcaggaactacttcaacttgctggacctg
ctggtggtcggcgtgtctctggtgtcatttgggatacaatcttcggcgatctctgtggtg
aagatcctgcgtgtactgagagtgttgaggcccctcagagccatcaacagggccaaagga
cttaagaacgtggtccagtgtgtgtttgtggccatcaggactatcgggaacatcatgatc
gttacaacgctgctccagttcatgtttgcctgtatcggagtgcagctctttaaggggaaa
ttttaccgctgcaacgacgaggccaaattaagcccggacgagtgcaagggcattttcatc
ttgtacaaagacggagacatgaatcatcccaccatccagaaacgccactggcacaacagc
gagttcaacttcgacaatgtgctcatggccatgatggcgctcttcaccatgtccacgttc
gagggctggccggcgcttctctacaaggccatcgattcgaacaaggagaacttcgggccc
atctacaactaccgtgtggagatctccatcttcttcatcatctacatcatcatcatcgcc
ttcttcatgatgaacatcttcgtgggtttcgtcatcgtgacgtttcaggagcagggagag
aaagagtaccagaactgtgaactggacaagaaccagcgccagtgtgtggagtacgccctt
aaagcccgacctctgaggcgctacatccctaaaaacccctatcagtacaagttctggtac
gtggtgaactccacagccttcgagtacatcatgtttgtcctcatcatgctcaacacgatc
tgcctggctgtgcagcactacgggcagtctaagacctttagctacgtgatggacatcctg
aacatggtgttcaccgcagtctttactgtggagatggtcctcaaactgatcgccttcaag
cccaggcattatttcactgatgcttggaacacgtttgatgccttaattgtagttggtagc
gtcgtagatattgctatcactgaagccaacccagcggagggggaggagttagtgaatgta
gaagaaaacgcccgcatctccattaccttctttcggctgttcagagtgatgcgtttggtc
aagctgctcaacaggggggagggaattcgtaccctcctgtggaccttcatcaagtccttc
caggctctgccgtacgtcgctctgctgatcgccatgctgttcttcatctacgccgtcatc
ggcatgcagatatttgggaagatagccatggtggaaggcacacaaatcaaccggaacaac
aacttccagacgtttccgcaagccgtgcttctgctgttcagatgtgccacaggtgaggcg
tggcaggaaatcatgctggcgtgtctatccgggaagctctgtgacccagagtcggactat
aatcctggagaggagatgacctgcggcagcggcttcgcaattgtctacttcatcacattc
tacatgctttgtgcattcctgatcattaacttgttcgtggccgtcatcatggacaacttt
gactacctgacccgtgattggtccatactgggaccgcatcacctcgacgagtttaagagg
atatggtccgaatacgatccagaagccaagggaagaataaaacatttagatgtagtgacg
ctactgcggcgcattcagcctccgcttggcttcggaaagctgtgtcctcacagagtagca
tgcaagcgtctagtggccatgaacatgcccctgaacagtgacggcaccgtgatgtttaac
gccacgctgtttgcactggtcaggactgcactgaagatcaaaacagatggtaatctggag
caggcaaatgaggagctgcgagccgtcattaaaaagatctggaagaggaccagcatgaag
ctgcttgaccaagtggtgccccctgctggcgatgatgaggtaacggtggggaagttctat
gccaccttcctgatacaggactactttaggaaattcaagaaacgcaaagaggagggactt
gtaggagtgcatcctacccagaacaacacggccatcacgctgcaggctggtctccgcacg
ctgcatgatattgggcccgaaatccgccgtgccatatcatgtgacctccaggatgaggag
ctagtagactttatacctgaggaggacgaggagatttataggcgaaacggtggccttttc
ggcaatcacattaaccacatcaacggcgacccccaccgaggttccgggcatcagaccaac
gccacgcagcgccccctacaggttcatccacccccgcactacgccgacatggaacagcct
gtgggccggctggaccgcgccaacgccatggcccaacataatcatcatcaccaccatcac
catcatcacaatcaccacaattcttacagcaagtcacccaagtccaccaacatcaatctg
aacaatgctaacatgtccagcctgcccaatggaggccataatcgctactaccagcatgcc
ccggcgaacggctacaccggaccgtactacccaggggaatacgaaaagcccagaacgcca
aacggacagagaaggcgctactatgagacctatattaggccacgtggcagcatccggcgc
caacccactattcgtcgtgaggaggattttgatgaagaccgctactctggggagtactac
agcggagaggagttttatgaagaggacggcatgctgtcgggagacaggtatcccagcagc
gatcaggagtacgagacgccccgtggctaccaccaccccgacagttactatgacgatgac
gagcagcccctttaccacgactcgtataggtcgccaaagagacggcagcttcctcccacg
ccacaaggcaaccggaggccgtctttcaactttgagtgtctgcgcaggcagagcagccag
gatgagcttcctcgccaacggactgctcttccgctccatttgatgcaacatcaggtgatg
gcagtagcagggcttgactggagtagagctcacagactctcgcctagtcgctccactcgc
tcgtgggccacgcctcctgccacgcctgccagtaaagaccgcaccccctactacacaccc
atgatccgtgtggaccgtccgcaccgggacagcatgggtggcagctactgctcggtgagg
aagagctcgtggtacacggatgacccggagtaccagcagagcacctactcgccggtgcac
ctgaaaatcccacccgagtaccggaaacagtaccaccagaagagagggagcgccaccagc
cttgtggaggcggttttaatatcagaaggactgggccgatacgctaaggacccaaagttt
gtggcggctacgaagcacgagatcgcagacgcctgcgacatgaccatagatgagatggaa
agtgcggcgagccacctgctgaatggcggagtcatgcccggggtcaacggggttaacgtg
tacccagtcatgactcagatagagtacgacgtgcaggacgtttcggccaactacagcgac
gaagagccagaagccgattcccggcctcgttatgaggaggacttggcggacgaaatgata
tgcatcaccacgttatag
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