Ictalurus punctatus (channel catfish): 108281069
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Entry
108281069 CDS
T04658
Name
(RefSeq) homeobox protein Hox-C11a
KO
K09296
homeobox protein HoxC/D11
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108281069
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
108281069
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3528
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108281069
NCBI-ProteinID:
XP_017352104
Ensembl:
ENSIPUG00000001956
UniProt:
A0A2D0TB61
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All DBs
Position
21:complement(11508055..11510953)
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AA seq
311 aa
AA seq
DB search
MFNSVNLGNFCSQTRKDRSAEFGERTGCGSSLYLPNCAYYVPEFSSSSSAVSSFLPQASS
RQIAYPYPTSLSHVQPVRDVSYGLDPSAKWHHRGGYAPCYAAEECLPPSSSMTEMLMKNE
SVYNNHHHHHHHHHPHHHHLHQQAGTSFYPATGKNNNVLPQGFDRFFEGAYAGSVEDCVQ
KEEDVSKTDPVVRTDPEKDHQREDEEEEDEHATTTSGASSAAVKDDGACKNEHSSTTRTR
KKRCPYTKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRD
RLQYFSGNPLL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactcggtcaatctgggcaacttctgctcccagacgcgaaaagacagaagtgct
gaattcggggagcggacgggctgcggctcgagcctctacctccccaattgtgcctactac
gtgcccgagttttcttcttcctcctctgcggtgtcgtcgttcctgccgcaggcttcctcg
cgtcagatcgcttacccgtaccccacaagcctgtctcacgtgcagccggttagggacgtg
tcgtacggactggatccgtcagccaagtggcaccacagagggggctacgcgccgtgctac
gcggcagaggaatgtcttccgccatcgtcctccatgacggaaatgctgatgaagaacgag
agcgtctataacaaccaccaccaccaccaccatcatcatcatcctcatcatcatcacctt
catcagcaagccggcacgagcttttaccccgccacgggaaagaacaacaacgtcctcccg
caaggttttgaccgttttttcgagggtgcctacgcaggctccgtagaggactgcgtgcaa
aaagaagaggacgtcagcaaaacggatccggtggtgcgtactgacccagaaaaagaccac
cagcgcgaggatgaagaggaagaggacgagcatgccaccacgacgtcgggtgcctcgtct
gcggcggtgaaagacgacggcgcctgcaaaaatgagcactccagtaccactcggacgcgg
aagaagcgatgtccatacaccaagtttcagatccgggagctcgaacgcgagttcttcttt
aatgtttacatcaacaaagagaagcggctgcagctctcgcgcatgctgaacctcaccgac
cgacaggtgaaaatctggttccaaaaccgacgaatgaaagagaagaaattaagccgagat
cgcctccagtatttttccggtaatcctcttttgtga
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