Ictalurus punctatus (channel catfish): 108281073
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Entry
108281073 CDS
T04658
Symbol
lamb3
Name
(RefSeq) laminin subunit beta-3
KO
K06244
laminin, beta 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04382
Cornified envelope formation
ipu04510
Focal adhesion
ipu04512
ECM-receptor interaction
ipu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108281073 (lamb3)
04518 Integrin signaling
108281073 (lamb3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108281073 (lamb3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108281073 (lamb3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG14
F5_F8_type_C
ATG17_like
Alanine_zipper
BAR_3_WASP_bdg
F5_F8_type_C_2
UBA_HOIP
Motif
Other DBs
NCBI-GeneID:
108281073
NCBI-ProteinID:
XP_017352106
UniProt:
A0A2D0TB56
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All DBs
Position
21:complement(21390932..21404534)
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AA seq
1163 aa
AA seq
DB search
MKNLIILQIIAALAAVCMAQQECVSGACYPPLGDLLIGRETELRASSTCGLSGIEVFCTP
LGQWKMKCCPCDSRTAAGQNAHTLQNVLSAAGPERWWQSKKNVSPVTIELDLKQLFHINN
LLLYFKGPRPDALVIERSSDFGRSWTPVIYMATDCESTFPHVLTMTSDLDNPHCYTLPSN
TNNPFQDQRVYFHPLLQYSNVPLPHEQKIERLSGYTGLRVNLTQFGAVPYTPGRHPSRFY
ALKEMKLIGSCFCHGHADHCLPDPTSKDLPNTEVYGTCDCQHNTAGVNCERCADLYNDLP
WHPAERDNTHTCKRCECNNHAQRCRFDHDLYEISGRRSGGVCEECTHHTTGTHCERCTEN
YYRNPWSNMQRPDACLRCQCDSAGSEAGRQCDEVTGACHCKENVEGARCELCKPGHYGLS
RNNPLGCSKCSCSPVGSLHSVCDAVTGQCVCEPNAGGRSCDRCAEGFWNSSSGCRPCNCD
LTNSISNTCDQVTGQCECRPGFGGRTCSGCPENTYGDPLTGCRACVCDRVGSLSGECDRR
TGVCVCKPGVVGDRCDMCGRGHCAQFPNCPVCPSCFFSLDAELQNLMLRLQRLTHTLTHT
LLPQIPPHTLQRITDAQHTLRRIITALQQLPNDKDLFDNYTHRLDPLRSELEKVEEDLRR
TGVLYTPDLEVELHRLQEQLSDLHLIYNAKKEAATHFNSSNYAGLLDAVKNAFNRSTDAV
KRANGAADTVDSSASVRDDAIKGLKNVQPINTQNLQTLLKDLATHPNLTPTATQVCGSRR
VLPCTPQQCEGELCPVDEAPPCVQGQKCMGALPWSQRAEQDTVEVKDKLQQLNDKITQAY
TQIQKSQDSTNQVRLSADELSNQMKRTRGDIDDGLKDIKDFVKKLKDFLSDPTSDPAAVQ
RVCEGVLGVKLPETVDALKKKLKEIQNVAASLPDTSMVLKNASSKLQEAEQLLQNAKNAR
DTALGLQENTDSVLASLNDGESALADMKEKLQHNLNITDQVRNNIQNVEDILLPVEHLVN
KGLGLVDTLRPLLDPLKEEVQRGRELAEEAGEKAEGAEHEANTAAQDLDLLQQQLLKLKE
NTDVNNTTDSAGKRLQTLQTEVTHLIQDTADILNQLTDKEAGLQKLGEELMGNSQRLDGL
ESRLNELISDISTKVTNLSGCVA
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatctgattattctacagatcatcgcagcattagcagcagtgtgtatggcgcag
caggagtgtgtgagcggggcatgttatcctccgctgggtgatttattgataggcagagag
actgaactcagagcatcgtccacatgtggtctctccggcatcgaggtgttctgtacacct
ttaggacagtggaagatgaagtgctgtccatgtgactcaagaactgcagcaggtcaaaac
gcacacacactccagaacgttctgagtgcagctggacctgagcgctggtggcagagcaag
aaaaatgtgagtcctgtcactatagagttggacctaaaacagctgtttcacatcaacaac
ctgctactgtacttcaagggtccaaggccggacgctctggtgattgagaggtcgtctgat
ttcgggaggtcgtggactccggtgatctatatggccactgactgtgaatccactttccct
cacgtcctcacaatgacctctgacctcgacaacccccactgctacacactgccctccaac
accaataaccccttccaggaccagagggtgtatttccaccctctgctgcagtactcaaat
gttcctctgccacatgagcagaagattgagaggctgtcaggttatacagggctgcgtgtg
aatctgactcagtttggggcggtgccttacacacctggccgacacccatcacgcttctat
gccctgaaggagatgaagctgattggctcctgcttctgccatggccacgctgaccactgc
cttcctgaccccacctccaaagacctgccgaacacagaggtatatggtacatgtgactgt
caacacaacacagcaggtgtgaactgtgagagatgcgctgacctttacaacgaccttcca
tggcacccagcagaaagagacaacacacacacctgcaaacgttgtgagtgtaataaccac
gcccagcgttgccgctttgaccatgatctgtacgagatcagcgggaggaggagtggtgga
gtgtgtgaagagtgtacacaccacactacaggaacacactgcgaacgctgcactgaaaac
tattacaggaacccctggagcaacatgcagagacctgacgcatgcttacggtgtcagtgt
gacagtgcggggtcagaggccgggcgtcagtgtgatgaggtgacgggggcgtgtcactgt
aaggagaacgtggaaggagcacgctgtgagctctgtaaacccggacactacggcctcagc
aggaacaatccactcggctgctccaagtgctcctgcagtccagtcggttccctccacagt
gtgtgtgacgctgtgacaggtcaatgtgtgtgtgagccaaatgcaggaggaaggtcatgt
gaccggtgtgctgagggattctggaactcctcatcaggatgtcggccatgtaactgtgac
ctcacgaactccatcagcaacacctgtgaccaggtaacaggtcagtgtgagtgtcgtcct
ggttttgggggtcggacctgcagtggctgtccagaaaacacgtatggagacccactaacc
ggctgtagagcatgtgtgtgtgaccgtgtgggcagcctttctggagagtgtgaccgtcgt
acaggtgtgtgtgtgtgcaagccaggtgtggtaggggacaggtgtgacatgtgtgggcgt
ggtcactgtgctcagtttcctaactgccccgtctgtccatcctgcttcttctcgcttgat
gcagagctgcagaacctcatgctccgtctgcagcggctcacacacacactaacacacaca
ctgctcccacaaatccccccccacacacttcaacgcatcacagacgcacagcatacactc
cggcgaatcatcactgccctgcagcagctccctaatgacaaagacctgttcgacaactat
acacaccgtttagacccgctgcgctctgagttggagaaggtggaggaggatttgaggcgt
acaggtgtactttatactccagacctggaggtggagctgcacagactccaggaacagctc
tctgaccttcacctgatttacaacgccaagaaagaagcagcaacacacttcaacagctct
aactatgctggactcctggatgcggttaaaaatgccttcaacagatccacagacgcggtg
aaacgtgcaaacggagcagcagacactgtggacagctcagcatcagtcagagacgatgcc
attaaaggcctgaagaacgtacagccaatcaacacgcaaaacctgcagacgctccttaag
gacctggcaacccaccccaacctcacacctacagccacacaagtgtgtggcagtagacgt
gtgttgccgtgtaccccacagcagtgtgagggcgagctgtgtcctgtagacgaagcgccc
ccctgtgttcagggacagaagtgcatgggtgcgttaccatggagccagagggcagagcaa
gacacggtggaggtgaaagacaaactgcaacaacttaatgacaagatcactcaggcatac
acacagattcagaagtcccaggactcgaccaatcaggtaagactgtctgcagatgagctg
tccaatcagatgaagcgtactcgtggtgacatcgatgatggactgaaggacattaaagac
tttgttaagaagctgaaggacttcctatcagacccgacctctgaccctgcagcagtgcag
cgtgtatgtgaaggtgtgttgggtgtgaagctgcctgagacggtcgacgccctaaagaag
aagctgaaagagattcagaatgtggctgcctcattgcctgacaccagcatggtcctaaag
aacgccagttcaaagctgcaggaggcggagcaattactgcagaatgccaagaacgccagg
gacacagcgctgggtctccaggagaacactgatagtgttctagcatctctgaatgatggc
gagagcgccctcgctgacatgaaggagaaactgcagcacaacctcaacatcactgaccaa
gtcagaaacaacatccagaatgtggaggacattctgcttcccgtggagcatctagtgaac
aaggggttagggttagtggacacactgcggccactgctggaccctctgaaggaggaagtg
cagagaggaagggaactagcggaggaggcgggggagaaggcagagggggcggagcatgag
gccaacactgcagcacaggacctggatttactgcagcagcagttgttgaagctgaaggag
aacacagacgtaaacaacaccacagattcagcaggaaaacgcctacagactctacagact
gaggtcacacacctgattcaggacacagccgacatcctgaaccaactcacagataaggag
gcagggctacagaagttgggggaggagttgatgggaaactctcagcggttggatggtttg
gagtctcggctgaatgaactgatcagtgacatcagcactaaagtcactaatctcagcggg
tgtgtggcctga
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integrated database retrieval system
