Ictalurus punctatus (channel catfish): 124626002
Help
Entry
124626002 CDS
T04658
Name
(RefSeq) GATOR complex protein WDR59 isoform X4
KO
K20409
SEA/GATOR complex protein SEA3/WDR59
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
124626002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
124626002
Membrane trafficking [BR:
ipu04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
124626002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
zf-RING_16
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_EML
eIF2A
zinc_ribbon_16
Beta-prop_WDR41
RWD
Beta-prop_DCAF4
zf-RING_2
MIOS_WD40
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
124626002
NCBI-ProteinID:
XP_047008506
UniProt:
A0A979ERR7
LinkDB
All DBs
Position
4:3280281..3300308
Genome browser
AA seq
986 aa
AA seq
DB search
MAARWSSENVVVEFRDAQATAMSVDCLGHYAVLSGRRFLYVVNLEAPSEAPRKIARQSKW
DVGTVQWNPHKTEAHLFAASSNQRVDLYVWRDGCGETHTSLQGHTRVISDLDWSWFEPEL
LVTSSVDTYIYIWDTRDTRKPTGALSAVAGASQVKWNKKNQHCLASSHDGDVRIWDRRKP
NTAVEYVAAHLSKIHGLDWHPDNEYILATSSQDNSVRFWDYRQPRKYLNILSCQVPVWKA
RYTPFSNGLVTVMVPQLRRENSLLLWSTLDLNSPVHAFVGHDDVVLEFQWRPQKEGAKDC
QLVTLSRDQTLRIWRVDPQLQKLCASDIVEELMEGMTLATESEKTLRSQEAPLSPGLSAG
DLQGRFEASSGRQDPAGLAQTLQQEFSLVNLQIRNVNVEMDAVNRSCFVSAHCGANQVRL
VVKFPAQYPNNAAPSFQFVPPTTISSSMKTKIQKILTDTSLQKVKRNQNCLEPCVRQLVS
CLESDAEDGTNPHVFSNSVSPALPAFPRVTNTYGSYQDANIPFPRTSGARFCGTGSLVYF
TRPMSMHRTVPPTEPTPRSLSALSAYHSGLMTPMKMRSESQSTLRLYSGSPTRTDKEQVS
ISSFYYKERKPLPVHRRWSVQTIADCPKSRRWKGKREGTDYSNKTLKLAGKVIIQEISCL
LPIHKALGETYVLNMNDIRDTCQKNAAAALTVGRRDLAKVWALSSAATSPDLCPDSDPDA
DTPWARHPFGRQLLETLLEHYSQMSDVQTLAMLCSVFRGQGIPQDYFALYGPRGSGFTLH
HSRYPSFTSSSVTSGSCSSTSDSITAPWNTAGRDAEQALPWGESSPDDARYANLAYSDPR
EREKEQHDVNKRSSFCSNTQLLLDPANTLQFDDFKKCYGEILHRWGLKEKRAEVLKFVSC
PPEPHKGIEFGVYCCHCRSQARGTQCAVCKRFTFQCAICHVAVRGSSNFCLSCGHGGHTS
HMMEWFRSQEVCPTGCGCHCLLQSTF
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccggtggagcagcgagaatgtcgtggtggagtttagagacgctcaggctact
gccatgtcagtggactgtctagggcactatgctgtactttctgggagacgtttcttgtat
gttgtgaacctggaggcaccgtctgaggctcctcgaaaaatagcccgtcagagcaagtgg
gacgtcgggacggtgcagtggaatccgcacaagacggaagcgcacctattcgcagcatca
agtaatcagcgtgtggacctgtacgtatggcgtgatggatgtggagagactcacacatcc
ctgcaaggccacacacgagttataagtgatttggattggtcgtggtttgagccagaactt
ctcgtcacaagttcagtagacacttacatctacatatgggacacaagagacacacgtaag
cctacaggagctctatcagcagtggccggagcatctcaggtgaagtggaacaaaaagaat
cagcactgtttggcttctagtcacgacggagacgtcaggatctgggacagacggaaaccc
aacactgctgttgaatacgtagccgctcacttatccaagattcacggcttggactggcat
cctgataacgagtatatactggcaacctccagccaggacaactcagttaggttctgggac
tacagacaacctcgaaaatacctcaatatcttgtcctgccaagttcctgtttggaaggcc
agatacacgccgttttccaacgggctggtgacggtgatggtgccgcagctcaggcgggag
aacagtcttctgctgtggagtacgctggacctcaacagccccgttcatgccttcgtaggt
cacgacgacgtggtgctggaatttcagtggaggcctcagaaagaaggagctaaggactgc
cagctagtcacgttgtccagagatcagacgcttcggatatggagggtggatcctcagttg
cagaagttatgcgccagtgacatcgtggaggagctgatggaaggcatgaccctcgcaaca
gagtctgagaagacactccgttcccaggaagcacctctgagccccggtctaagtgctgga
gacctgcagggtcggttcgaggcgtccagcggcaggcaggaccccgctggcctcgctcag
accctgcagcaagagttctcgctggtcaacctgcagatccgcaatgtcaacgtggagatg
gatgccgtgaaccgctcctgcttcgtctcggcccactgcggagcgaatcaggtcaggctg
gtggtgaagtttcctgcacagtatccaaacaacgctgcgccgtctttccagtttgttcca
cctacaaccatctcgtcctccatgaagaccaagatacagaagattttgacggacacgtcg
cttcagaaagtgaagaggaaccaaaactgcctggagccgtgcgtgaggcagctggtgtcc
tgcctcgagtcagacgcggaggacggcaccaatccgcacgttttcagtaactcagtgagc
cctgctcttcctgccttccctcgcgtcaccaacacttacggctcttaccaggacgctaac
atccctttcccacgtacctcaggcgcacgcttctgcggcacaggctctctggtttatttc
actcgacccatgtccatgcatcgcaccgtccctcctacagagcctacgcctagatcactc
tctgcgctgtctgcgtaccacagcggccttatgactccgatgaaaatgcgtagcgagtct
cagtccacgctgcggctgtacagcgggagtccaacacgcaccgataaagagcaagtgtcc
atctcatccttctactacaaggaacggaagcctctgcctgtccatcgccgctggtctgtg
cagactattgctgactgtccgaaatcacggcgctggaaagggaaacgcgagggaacagac
tacagcaataaaacgctcaaactggctgggaaagtgatcattcaggagatttcctgtctc
ctccctattcacaaagccctcggagagacctacgtattaaatatgaacgacatacgggac
acgtgtcagaagaacgcagccgcagctctgacagtaggacggcgagatctagcgaaggtt
tgggctttgtcctcggcagcgaccagtcccgacctgtgtcccgactccgatcctgacgcc
gacactccttgggctcgacacccgttcggccgacagctgctggagactttgcttgaacac
tacagtcagatgagtgacgtgcagactctggccatgctgtgcagtgtgttcaggggtcag
gggatccctcaggactatttcgcgctgtacggcccacgcggctcaggcttcaccctccac
cactcgcgctaccccagctttacttccagctcggtcacgtctggttcctgctccagtacc
tccgactccatcaccgctccgtggaacacggctggacgcgacgctgaacaagctctaccg
tggggagagtcctctcctgacgacgctcgctacgcaaacctggcttactccgatccccgg
gaacgagagaaagagcaacacgacgtgaacaaaaggtcgtcattctgctccaacacccaa
ctattattagacccggccaacaccttacagttcgacgactttaagaagtgttacggagag
attctgcaccgctgggggctgaaggaaaagagggcagaagtgctgaagtttgtttcttgc
cctccagagccacacaaggggatcgagttcggcgtgtactgctgccactgtcggagccag
gccagaggcactcagtgcgccgtgtgcaagcgcttcaccttccagtgcgccatctgccac
gtggccgtccgcggctcgtccaacttctgcctgagctgcggccacggcggacacaccagc
cacatgatggagtggttccgctcgcaggaggtttgtcccacgggctgcggctgtcactgt
ctcctccagagcactttctga
DBGET
integrated database retrieval system
