Ictalurus punctatus (channel catfish): 124626008
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Entry
124626008 CDS
T04658
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
124626008
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
124626008
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF_3
FXa_inhibition
EGF
hEGF
EGF_2
EGF_TEN
Plasmod_Pvs28
EGF_Teneurin
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
124626008
NCBI-ProteinID:
XP_047013390
UniProt:
A0A979F088
LinkDB
All DBs
Position
9:21935473..22058818
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AA seq
1810 aa
AA seq
DB search
MDRVWILLVMSLGISLAHMLDGWRARAGGRERRDAAAASVHAVFEQLRARSLNAAPSGPI
RSHALDSEENPPSDTDTEPAAHEPLQEADTGEAREKAGRIPRQTGRSVASHRARSISKAD
TPERADSKPDHPKRLVGPHVCGGQQCCSGWAVAPGTNRCIKPDCQPPCQNRGSCSRPHTC
VCRSGYQGPRCEELAPEQVYIHTGTSRVLMPIQPGKDTTRHQSARRRPTERQASESIPKT
QTPKPPTGRVGHSSGTQVRRGSPEVTLQQTGSGQSHVSRTVKRYPSSTAPITSNALPIAN
GHNHGHTHTQHVTYSNGQPHTSSNTVTPTGANLTANVDRIKIVFTPMVCRRICHGGQCYN
SCERGDKTTVYSENQGPPAKTNGFRLFFCQIPCLNGGRCIGQNECWCPSNATGKFCHLPT
PTPSKPSQGRQPNSNRVQNGSSHTVYTLPLSNQQASLLPSLVNVHVQHPPEAQFQIHQVA
RVKPGQTVETGHSVQQRSQPGSNHINANGNGNGQNSVRSTGHNNGQNHHRLHINLNGHVG
RCFQETVDGKCGKPLPGLTNQEDCCGSVGASWGLHKCTECPSKPAYAVIANGLVECPRGY
KRMNSTHCQDINECLFPGVCKHAECLNTKGSYRCTCKPGYMLDAARSQCVSDKAVSVEQA
SCYRSISPGSCSHPLAQKITKQICCCSRVGKAWGSACERCPLPDTDHFKEICPAGHGYTY
SRSDVQITLRELEEEELTEVDTFFSQNPTYPEPPRTLPQTPYQEPLPPVYPESPYHKPSV
PSYPQTPARSQPPRTGYIPLHPPPVSLPEDVETVNEPINTPPSYPDVVEVTSNSPTYLMP
DSENRDTAPINVATQVTDIDKCSLTPTICGPGQCVSVQTGYTCHCDPGYTLNALQTTCID
VNECLNDPCRGKGHCVNTFGSYTCQCFPGYSLLMTQNRKLCQDINECAMPNKCPNGQCIN
TEGSFRCECRSGFTKNQRGECEDVDECRSPGVCPSGKCVNTHGSFKCQACGPGFRPDAGR
CLDINECQMAAVCTNGQCVNTEGSFTCTCNHGYQTTPGNKSCQDVDECLLPDVCPHGTCV
NVPGSHRCSCNTGYQSSHNGKACVDVDECAEPSLCMRGVCVNTLGSFTCTQCEVGYTLSD
DRQRCADIDECRSLSPCPNGICLNSEGSYSCITCPTGFTVSSDGELCEDIDECHSPNICP
LAACTNSEGSYSCMACESGYKVSSDQRTCEDIDECEDLAACLNGQCTNTAGSYHCGCTPG
FELLNSVCKDIDECEDEMICGKHGFCENTNGSYYCHCDQGYVNTPEGQGCIDADECEISS
ELCGEAHCENVEGSFLCLCPTDDEEFDPITTQCKPRHMILPDSAGHDLPAPPHGASDDEQ
RKDCYYNLHDANFCENVLSSNVTKQECCCTVGAGWGDNCNMHPCPQNGQVEFSELCPHGP
GILPIVTSVQGFNHLLSRDADECEMYGPEICKNGYCANVYGSYNCYCHSGYYYDNVRMAC
LDDDECKEENQCEHGACVNTPGSFNCFCMAPMILDDTQRRCISANSTEAPFLDEDYIHTD
ICWRELKPDTTCINPMLGIPTTYTECCCLYGVAWGSQCAFCPEKSSADFAMLCNLHNRGS
DSLREHPGFEYGPDTPPEGPNGPPFWDNYGVFGGETFYGPDGPLRGSMFTDHSNDYSSRE
GGRVPMPRPREHHPPRRVNPYRDHSAGFEGLQAEECGILNGCENGRCVRVREGYTCDCFD
GYELNLSKMACIDINECEDISDKVELCKNGVCTNTEGSYKCTCLPGFLASSKPHECIPED
QDSVTHTVGN
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgtgtggattttgctcgtgatgtcgctcggcatctcgctcgcgcacatgctt
gacggctggagggctcgtgcaggtggccgcgagcggagagacgcagccgccgcctccgtg
cacgccgtgttcgagcagctgcgagcgaggagcttgaacgcagctccttcaggtcctatc
aggtctcacgcactcgactcggaggaaaatccgccgtcagacaccgacaccgagccggcg
gctcatgagccattacaggaagcagacaccggagaagcccgggagaaagccggtagaatt
ccgagacaaactggcaggagcgtcgcttctcacagagcgcggagcatcagtaaagccgac
acacctgagcgcgcggacagcaaacctgatcatccaaaacgcctggtcgggccacatgtg
tgtgggggtcagcagtgctgttcaggatgggctgttgcacctggaacaaaccgctgcatc
aaaccggactgccagccaccatgtcaaaaccgcggctcatgtagtcgcccacacacctgt
gtgtgccgctcgggttatcagggaccacgctgtgaagaactggcgcctgagcaggtttat
atccacactggcacatccagagtactgatgcccatccagcctggaaaggacaccactcgg
catcagtctgcccgcaggagacccactgagagacaagcaagtgaaagcattcccaaaacc
caaacaccgaagccgccaactggcagagtgggccattcatctggaacccaggttagacga
ggttctcctgaggtcactctgcagcagactggttcaggacagtctcatgtctccaggacg
gtcaagcgttatccttcatctacagcacccataacctcaaatgctctgcctattgcaaac
ggacacaaccatggacacacgcacactcagcatgtcacctactctaatggccagccacat
acctccagcaacacagtgactccaacaggagcaaaccttacagctaatgtggaccgtatc
aagatcgtctttacacccatggtgtgtaggaggatttgccatggggggcaatgctacaat
agctgcgagcgtggagataagaccacggtgtacagcgagaaccagggcccgccggccaag
accaacggcttcagactctttttctgtcagattccgtgcttgaatggaggacggtgtatt
gggcaaaatgaatgctggtgcccatcaaatgccacaggaaagttctgtcaccttccgact
ccgactcccagcaaaccctcacagggccgacaacccaacagcaacagagtgcagaacggc
tcatctcacactgtctacaccctgcccctgtctaaccagcaagcctcccttttaccctcg
ctggtgaatgtgcatgtccagcacccaccagaagctcaatttcagatccaccaggttgca
cgggtcaaaccgggccaaacagttgaaacaggacactcagtacaacagcgctctcagcct
ggcagtaatcatatcaatgccaatgggaatggcaatgggcagaacagcgtgcgcagcact
gggcacaacaatggacagaaccaccacaggctacatattaacctaaatggacacgtggga
aggtgtttccaggaaacagttgatggaaagtgtgggaagcctctgccaggtcttaccaat
caggaagactgctgcggcagtgtgggagcgtcatggggtctacacaaatgcaccgagtgt
cccagcaaaccggcttatgcagtgattgcaaatggcctagtggaatgtcctagaggctat
aaaagaatgaattcaactcattgtcaagatatcaacgagtgtctgtttcctggggtgtgt
aaacatgctgagtgtctgaacactaagggcagctacaggtgcacgtgtaagcctggatac
atgctggatgctgcacgcagtcagtgtgtctctgataaagcagtttctgtggagcaagct
tcatgctatcgctccatttcaccgggttcatgtagccatccactggcccagaaaatcacc
aagcaaatctgctgttgcagccgtgtgggaaaggcctggggctcggcctgtgagaggtgc
ccattacctgacacagatcactttaaggagatctgtccagcaggccatggctacacctac
tctcgctcagacgtccagatcacactccgtgagctggaggaagaggagctcacagaagtc
gacactttcttttctcagaatcccacataccctgagcctcctcggaccttgccacagaca
ccttatcaagaaccactaccacccgtataccccgagagcccgtatcacaagccctcagtg
ccatcttaccctcagacacctgcaaggtctcagccacccaggactggttacatacctctt
caccctcctccagtctccctacctgaagatgttgaaacagtgaatgagccaattaataca
cctccttcatacccagatgtagtggaggtcacctctaactctcctacgtatctgatgcca
gactcagagaatcgtgacacagcaccgattaacgtcgccactcaggtcacagacatcgac
aagtgttcgctgactccgacaatctgtggtccaggccaatgtgtgtcagtgcagactggc
tacacctgtcactgtgacccaggctacaccctcaatgctctgcagaccacttgcattgat
gtcaatgaatgtttgaatgacccatgcagaggaaagggccactgtgtgaacacttttggc
tcctacacctgccagtgtttcccgggctacagcctgctcatgacacaaaacagaaaactg
tgtcaagacataaatgagtgtgccatgcctaacaaatgtcccaatggccaatgcatcaac
actgagggatcctttaggtgtgaatgcagaagtggcttcaccaagaaccagagaggagag
tgtgaagatgtggatgagtgcaggagccccggtgtctgccccagtggtaaatgtgtgaac
acacacggctcattcaagtgccaagcatgtggccctggattcaggcctgacgctgggaga
tgtctggacattaatgagtgtcagatggcagctgtatgtactaatggtcagtgtgtgaac
acagagggctccttcacttgtacatgcaaccatggataccaaacaactcctggcaataaa
agctgccaagatgtggacgagtgtctgctcccagatgtctgccctcacggcacatgtgtt
aatgtgccgggctcacacaggtgcagctgtaacacgggttaccaaagcagccataatggc
aaggcttgtgtggatgttgatgaatgcgccgagcccagcctgtgtatgcgaggtgtgtgt
gttaacacgctgggctccttcacctgtacccagtgtgaagttggatacactctctctgac
gacagacagaggtgtgcggatatagatgagtgtcgctccttgtctccgtgcccgaatggc
atctgtctgaactcggagggttcatactcctgcataacatgccccactggtttcactgtc
tcatcagatggagagctgtgtgaagatattgatgaatgccattctcctaacatttgcccc
ctggctgcttgtacaaactctgagggttcgtattcctgcatggcctgtgaatccggctac
aaggtctcctcagaccagcgcacatgtgaagatatcgatgaatgtgaggatttggcggcc
tgtctgaatggacagtgtacaaacacagctggctcctaccactgtggctgcactccaggc
tttgagctactaaactctgtctgcaaagatattgatgagtgtgaggatgagatgatctgt
ggcaagcatggcttctgtgagaacacaaatggctcctattactgtcattgtgaccaagga
tatgtcaatacacctgagggccaaggttgcattgatgcagatgaatgtgaaataagtagt
gagttgtgtggtgaggctcattgtgagaatgtggagggaagcttcctgtgcctctgcccc
actgatgatgaggaattcgaccccattactacgcagtgcaaaccccgccacatgatctta
ccagactctgcaggacatgacctccctgctcctccccatggtgcctctgatgacgaacag
aggaaggattgctactacaacctacacgacgccaacttctgtgaaaatgtgctgtccagt
aatgtcaccaagcaggaatgctgctgcactgtaggagcaggctggggagataactgcaac
atgcacccatgcccacaaaatggacaagtggagttttctgagttgtgtcctcatggtcct
ggcattctccccatcgtcacctcagtccaaggcttcaatcatctcctgagtagagatgca
gatgaatgtgagatgtatggcccagaaatttgtaaaaatggttattgcgcaaacgtctac
ggctcgtataactgctactgtcacagtggctattactacgataatgtccgtatggcatgt
cttgatgatgatgaatgtaaggaggaaaatcagtgtgaacatggagcgtgtgtgaacacc
cccggctcttttaactgcttctgcatggctccaatgatcctggatgacacacaacgtcgc
tgcatctctgccaacagcacagaggctcctttccttgatgaggattatattcacacagac
atctgctggcgggaacttaaacctgataccacatgcattaatcccatgcttggtattccg
actacctatactgagtgttgctgtctctatggtgttgcctgggggtcacagtgtgccttc
tgcccagaaaagtcatctgcggattttgctatgttgtgtaacctgcataacagaggttca
gacagcctacgagagcatccaggctttgaatatggacctgacaccccacctgagggaccc
aatggtccaccgttctgggataactatggagtttttggaggtgagaccttctatggacct
gacggccctttgaggggttccatgttcactgatcactcaaatgactacagctctagagag
ggaggacgagtacctatgcccagacccagagagcaccatccaccccgccgagttaacccc
tacagagatcatagtgcaggatttgagggtctgcaagctgaagaatgcggcatcttgaat
ggctgtgaaaatggccgatgtgtccgtgtacgagagggctacacttgtgattgctttgat
ggctacgagctaaacctaagcaagatggcatgtattgatataaacgaatgtgaggatatc
agtgacaaagtggagctgtgtaagaacggagtgtgtaccaacacagagggctcatacaaa
tgcacctgcttgccgggctttttggcttcttctaagccccacgagtgtatcccagaagac
caagactctgtcacccacactgtgggaaattga
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