Ictalurus punctatus (channel catfish): 124626058
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Entry
124626058 CDS
T04658
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X1
KO
K09099
aryl hydrocarbon receptor nuclear translocator-like protein 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
124626058
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124626058
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_INO2
PAS_2
RBB1NT
PHTB1_N
bHLH_HIF1A
Motif
Other DBs
NCBI-GeneID:
124626058
NCBI-ProteinID:
XP_047008794
UniProt:
A0A979EET2
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Position
4:complement(10533625..10566929)
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AA seq
633 aa
AA seq
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MSATDAAAAAGDRAPGGETGDAMEEGLQSRSVSVSSQVTPTSAAGMASGMELPRKRKGST
DKETKSASVLDEDMEEEQERSEGDDPHVKMKCFREPHSQIEKRRRDKMNNLIDELSAMIP
TCNPMSRKLDKLTVLRMAVQHLKSLKGTTSSFAEANYKPSFLPDDELKHLVLRAADGFLF
VVGCDRGKIVFVSESVSKILNYTRPELIGQSLFDYVHPKDIGKVKEQLSASELYPRERLI
DAKTGLQVQADLPVGATRLYSGARRSFFCRMKCNKVAVKEEKDFQASSSKKKESQRYCTV
HCTGYMRTWPTSQLGAEGEAEADKESSHFSCLVAVGRVHPHSIPQANGEVKVKPTEFITR
CAMDGKFTFVDQRATTVLGYLPQELLGTSCYEYFHQDDLLHLADRHRKVLRSKEKIETNC
YKFKTKYGSFVTLRSQWFSFINPWTKEVEYIVSTNTVMSDKSNSSGSGDKSEQPIDSKAL
EEDAKKSLPIIPGISNASGTMIYAGSIGTQIANELLDFNRMNSSPSSGNASPFSVLQDKS
PLVLAQASSNVPNGEVTESHVPSKSGSEDDSHSGPYPGSENVMEGPSQLDLEGVPGLGSL
SSDEADMAVIMSLLETDANLGEGMNFDEMRWSL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgaccgatgcagcggctgctgccggtgacagagcccccgggggagagacaggc
gatgcgatggaggagggtctccagagtcgctctgtctctgtttccagtcaggtgaccccc
acctcagctgctggaatggcatctggcatggagctacccaggaaacgcaagggcagcact
gacaaggaaactaaatcagcatcagtgctggatgaagacatggaggaggagcaggaaagg
tccgaaggggatgatccacatgtgaaaatgaagtgtttcagggaacctcacagccaaatt
gaaaaaaggcggcgggacaagatgaataacctgatcgacgagctgtcggccatgattccc
acgtgtaaccccatgtcccgcaagctcgacaaactcactgtgcttcgcatggctgtgcaa
cacctcaagtcactcaaaggcacaaccagctcctttgccgaagccaactacaagccttca
ttccttcctgatgatgaactcaagcaccttgttctcagggctgcagatggattcctgttt
gtggttggatgtgaccgggggaagatagtctttgtttcagagtctgtttcaaagattctg
aactacactcggccagagctgattggccagagtttgtttgactatgttcatccaaaggac
ataggaaaagtaaaggagcagctctcagcctccgagctctacccacgggaacgccttata
gacgccaaaacgggactccaggtgcaagctgatctccctgtaggagccacccgtctgtat
tcaggagctcgccgctcttttttttgccgaatgaagtgcaacaaagttgctgttaaagaa
gaaaaagacttccaggccagctcatcaaaaaagaaagaatcacagcgttactgcacggtg
cactgtaccggctatatgcgcacttggcccaccagtcagctcggagcagagggtgaggcc
gaggccgataaggagagctcccacttcagctgccttgtagccgtgggccgtgtgcaccct
cattccatcccccaggccaacggagaggtcaaggtcaagcccacagagttcatcactcgc
tgtgccatggatggcaaattcacatttgtagatcaacgagccaccaccgtacttggatat
ctaccacaggagctgctaggcacatcctgctatgaatactttcatcaagacgatttgctc
catttagcagaccgacaccgaaaagttttgagaagtaaagagaagattgagacaaactgc
tacaagttcaaaacaaaatatggctcttttgtcaccttgcgaagtcagtggtttagtttt
ataaatccctggaccaaagaagtagaatatatagtgtcaacaaacacggtcatgtctgat
aagagcaattccagtggatcaggggacaagtcagaacagccaatagattccaaagctttg
gaagaggatgcaaagaaatccctccccatcatcccgggcatctcgaatgcttcgggcact
atgatttatgctggaagtatcggaacacaaatagctaatgagctactggattttaatagg
atgaactcttccccatccagtggcaatgccagccccttcagtgtgctgcaggacaaatct
cctctggttctcgcccaagccagcagcaatgtgccaaatggggaagtgacagaatcgcat
gtgcccagcaagtcaggctcggaggatgactcgcatagtggaccctatcctggaagtgaa
aatgtcatggagggaccatctcagttggatctagaaggggtcccaggtctaggaagttta
agcagtgatgaggccgacatggcagtcataatgagcctgctggaaactgacgccaacctg
ggagagggcatgaactttgatgagatgcgctggtctctctaa
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