Ictalurus punctatus (channel catfish): 124626674
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Entry
124626674 CDS
T04658
Name
(RefSeq) RNA-binding protein NOB1 isoform X1
KO
K11883
RNA-binding protein NOB1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124626674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
124626674
03051 Proteasome [BR:
ipu03051
]
124626674
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
124626674
Proteasome [BR:
ipu03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
124626674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
WRNPLPNID
Zn_ribbon_NOB1
DZR_2
HypA
Zn_ribbon_8
Zn_ribbon_15
DZR
DUF7129
Motif
Other DBs
NCBI-GeneID:
124626674
NCBI-ProteinID:
XP_047008512
UniProt:
A0A979EHU7
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Position
4:complement(3275139..3280223)
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AA seq
477 aa
AA seq
DB search
MVASMVEHVVADAGAFLKNAALHEIGKNIYTLKDVVNEIRDKQTKKNLAFLPYKLTFKEP
FPEHVRFVTEFAKKTGDYPSLSATDIKVLALTYQLELENCGAAHLKKEPAVQVEIRSTPR
HPEAPVNIAGFHLPSKQKSSACSVTDVQQHVASREHPSAEISEFNSFQFWREPLPSVDDD
LLKLVESSSGSVADVRHDDVSREPPTTESSEFNSFQFWRDPLPSIDDELLKLVVSKDVPE
KAQRVDVTSPSAEKEDEDGVEEEEGEEDGGGGWITPGNIKRIQMDAGEVRPPENVTVGCV
TTDFAMQNVLIQIGLNVLSVNGMLIRHTRNYILRCHACFKTTTNMNKAFCPHCGNNTLKK
VAVTLAEDGNMQMHFSSNPKVLNPKGKRYSMPLPQGGKHSNNPHVVDDQRFPQQRLSRKA
RAKTDALDPDYLAGGSPFTEHDLYSRAANLNLREAQCGGGRRRANPNASRKKFVKKK
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggtggccagcatggtggagcatgttgtagctgatgcgggggctttcttgaaaaacgcc
gctttgcatgaaattgggaagaatatctacacgctgaaggatgtggtgaacgaaatccgg
gataaacaaacaaaaaagaacttggcgtttttaccctacaagctcacctttaaagaacct
tttccagaacacgttcgattcgtgaccgagtttgccaaaaagaccggggattatcccagc
ctgtcagctacggacattaaggtcttggctctgacctaccagctggagttggagaactgt
ggagctgctcacttgaagaaagaaccagcagtacaggtggaaatacgcagcacgccgaga
cacccagaagctccggtcaacatcgctggattccaccttccttctaaacagaaatcctca
gcctgctcagtgactgacgttcagcagcatgtagcatcacgtgaacatccatctgccgag
atctccgagtttaacagtttccagttttggagagagcccttacccagtgttgatgatgac
ttactgaaattggtggaatcctcatccggctcggtcgctgacgttcggcatgacgacgtg
tcacgtgagcctccgaccaccgagagctcggagttcaacagcttccagttttggagagat
cccttacccagcattgatgacgagttattaaagttggttgtgagtaaggacgtcccggag
aaagcgcagcgtgtggatgtgacgtctccgagcgccgagaaagaggatgaggatggtgtg
gaggaggaagagggtgaagaggacggcggcggcggctggatcactcccggtaacataaaa
cgaatccagatggacgccggtgaagtccgtcctccggaaaacgtcacggtgggctgcgtg
accaccgacttcgcaatgcagaacgtgcttattcagatcggcctgaacgtgctgtcggtc
aacggcatgctcatcagacacacgagaaactacatcctccgctgccacgcctgcttcaag
actacgacaaatatgaacaaagctttctgtccacattgcggcaacaacacgctaaagaag
gtggcagtgacgctcgccgaggacggcaacatgcagatgcacttctccagcaaccccaaa
gtgctcaatcctaaaggaaagaggtactctatgcctttaccacaaggcggaaaacactca
aacaacccgcacgtggtggatgatcagcgtttccctcagcagcgactctctcgaaaggca
cgggcgaagacggacgcgctcgacccggactacctcgccggtggatctccgttcacggag
cacgacctttacagccgagcggcgaatttaaacctacgggaggctcagtgcggaggaggg
agacgacgcgccaatccgaacgcctctcgcaagaagttcgtcaagaaaaagtga
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