Ictalurus punctatus (channel catfish): 124627078
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Entry
124627078 CDS
T04658
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04120
Ubiquitin mediated proteolysis
ipu04144
Endocytosis
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124627078
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124627078
09144 Cellular community - eukaryotes
04530 Tight junction
124627078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
124627078
04121 Ubiquitin system [BR:
ipu04121
]
124627078
03029 Mitochondrial biogenesis [BR:
ipu03029
]
124627078
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124627078
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
124627078
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
HECT type E3
124627078
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
124627078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
124627078
NCBI-ProteinID:
XP_053534167
UniProt:
A0A9F7TI86
LinkDB
All DBs
Position
4:33668217..33714084
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AA seq
1246 aa
AA seq
DB search
MAHRLRMHFAARRSNTDPLSESCSHEVEDGLGTPARSPAEPLSHPNSFHMKVTPGQLALG
LPPLSPDYGSLQRHTTVFVPKVNSSGGNRKSTLQISLQSSSRQNLDGDGCSGGGEETDPG
ICDGGAGGNSDGGSCSSSTASDVGYCSSNSIFDSDVAERKMSHDKGTCRRRTKAPLRRCS
SLVIFPRSPCTTPPASPVSPVAAPLLPPSNRGPFQTSHQLQLSAADSSPDEPKVSVASAV
NGVRLSKSSCQPAEVRDARPIMHFSISTDPMIRSEQSERHSGVLVHPANQPPLPPGKGNP
ARTVVNVDCSKSSEKSEEANTKLGNRNPKLYRSTSACMLPTGKLSTEKRHHTCPTIGKSN
TYQEICFHRGLQRSISLEVPFSNTGISCHMSNTKQPSRMNGAAHVHIYVSRGNGVKAPDS
PKDTSANDKKELALTNSGTRDDFLGQVDVPLHQIPTEAPGSERPYTFKDFLLHPRSHKSR
VKGHLRLKMTYLPKSGSEEEQTEQVEEVDPGWEFLESQDVCGPCQPHQLPPLPPGWEERQ
DNLGRTYYVNHENRTTQWHRPTIQDVQREAELTQSTHVQLPFITRRQISDHDENNDRRES
PESWEIITEDEGTLYSSQNQLSPPPPHSPLDYTAFTEEFCRLQTGNENRTSVTGHGSRRG
SAPLLTVEERPVHPVMLPTTPGLPPGWEEKQDSKGRVYYINHKSRISTWTRPLVQLIQPT
DGSSSSAAGGACGRSPSPTVYAPPQASPQASPLHSPGPQQSHTFDFAGSMLPGWEVRVAP
NGRPFFIDHNTKSTTWEDPRLRIPVHMRKQASLDPNDLGPLPPGWEERVHSDGRIFYIDH
NTKTTQWEDPRLQNSAITGPAVPYSRDYKQKYEYFRKKLKKPGDIPNRFEMSVRRNALLE
DSYRRILSVKRPDLLKARLWVEFAGERGLDYGGVAREWFFLISKEMFNPYYGLFEYSALD
NFTLQINPNSGLCNEDHFSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQKPITLQDI
ESVDSEYFNSLKWILENDPTDLDLRFTIDEELFGQTHQHELTPGGADVVVTDSNKKEYIH
LVMQWRFVNRVQKQMSAFKEGFYELIPQDLIKIFDENELELLMCGLGDVDVNDWRENTKY
KNGYGPNQPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQ
WGTRDKLPRAHTCFNRLDLPPYESFEELREKLNIAIENTQGFDGVD
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggcacatcgtctgcgcatgcattttgccgcaaggagaagcaacaccgaccctctgtct
gaaagctgcagccatgaggtggaggacggacttgggacacctgctcggagcccggcagag
cccctgagtcaccccaactcgtttcacatgaaagtaactccaggacagctggctcttggt
ctgcctcctctttcaccagattatggcagcctgcaacgccatactactgtatttgtaccc
aaggtgaacagcagcggtgggaacaggaagagcacactccagatttccttgcagtcttcc
agcaggcagaatttggatggagacggttgcagtggtgggggagaggaaacagaccctggg
atttgcgacggcggtgctggaggcaactctgacgggggatcgtgtagcagcagcacggct
agcgatgtcggctactgcagcagcaacagcatattcgactcggatgtcgctgagcgcaag
atgtcccacgataaaggtacatgccgtcggaggaccaaggctcctttacgccgctgctcc
tcgctggtcattttcccacgtagtccctgcaccacaccgccggcttcgccggtcagtccc
gtggcagctcctctgctgccgccgtctaaccgaggaccctttcagacctcacaccagctg
cagctgtccgcagcagattcgtctccggacgagcccaaggtctcggtcgcctcagcggtg
aatggtgtgagactttccaagagcagctgtcagcccgccgaagttcgggatgccaggccc
atcatgcattttagcatttcgactgacccgatgataagatctgaacaatccgaaaggcac
tccggtgtcctggtgcaccctgcaaaccagcccccgcttccacctgggaaaggaaacccg
gccagaaccgtggtcaacgtcgactgctctaaatcctcggaaaagtcagaggaagccaac
actaaacttgggaaccgtaatccgaagctgtaccgtagcacttcggcctgtatgcttccc
acggggaagttatcgacggagaagagacaccacacttgtccgactatcggcaaatcgaac
acgtatcaggaaatctgttttcaccgaggcttgcagaggagtatttccctcgaggtgccc
ttctcgaacactgggatatcatgccatatgtccaacacaaaacagcccagccgcatgaat
ggcgcggcacacgtgcatatatacgtgtcccgagggaatggtgtgaaagcgcccgactcg
ccaaaagataccagtgccaatgataaaaaagaactggctcttaccaactctgggacgcgt
gatgactttctgggtcaggtggacgttcctctgcatcagatccccacagaagcaccgggc
agcgagagaccgtacacgttcaaagactttctgctccatccgagaagccacaagtcaagg
gtcaaaggtcacctgaggctaaagatgacctacctgcccaagagtggttcagaggaggag
cagaccgagcaggtcgaggaagtggaccccggctgggagttcctggagagtcaggatgtg
tgcgggccgtgccaacctcaccagctgcccccgctgccccctggctgggaggagaggcag
gacaacctcggcagaacctactacgtcaaccacgagaaccgcaccacacagtggcacaga
cccacaatccaggacgtgcagagggaggcggagctgacgcagagcacgcacgtacaactt
cctttcatcacgcgcagacagatctctgaccacgatgagaacaacgatcgcagggagtct
cccgagagttgggagatcattactgaggacgagggcactctgtacagcagtcagaatcag
ctctctccccctcctcctcattcaccgctggattacacggctttcactgaggagttctgc
aggttacagacgggcaacgagaaccgcacctctgtcacaggtcacgggagtcggagaggg
agcgcaccgttgctgactgtagaggaacgtccggttcatcctgtgatgttgcccacgacc
ccgggtttgccccctggctgggaggagaagcaggacagtaagggtcgagtttattacatc
aaccacaagagcagaatctccacctggacccggccacttgtccagttgatccagcccact
gacggatcctcctcgtctgcggcgggcggagcgtgtggtcgctctccgagccccacggtg
tacgcaccgccccaagcctcgccccaagcctcgcccctgcactcgcccggcccgcagcaa
tcgcacaccttcgacttcgctggctccatgctcccgggctgggaggtccgggtcgctccg
aacggacggccgttcttcatcgaccacaacaccaagagcactacgtgggaagaccccagg
ttgaggattcctgttcacatgaggaaacaagcctctctcgaccccaacgacctcggcccg
ctgccgcctggctgggaggagagggttcacagtgacggaaggatcttctatatcgatcac
aacacgaagaccacacagtgggaagatcccagactgcagaactccgccattaccggacca
gctgtgccttactccagagactacaagcagaagtacgagtatttccgcaagaagctgaag
aagccaggagacatcccgaatcgtttcgagatgtccgtgagacggaacgctcttctggag
gactcataccgccgcatcctgtccgtcaagcgacccgacctcctcaaggcccgcctctgg
gtggagtttgcaggggagagggggctggactacgggggcgtggccagagagtggttcttt
ctcatctccaaggagatgttcaacccttattacgggctgtttgagtactctgctctggac
aacttcacgctgcagatcaacccaaactcgggcctctgcaacgaggatcatttctcctac
ttcaaattcatcgggcgtgtggcggggatggccgtctaccacggcaagctgctggacgcg
ttcttcattcgaccgttctacaagatgatgctgcagaagccgatcacgttacaggacatc
gaatctgtggacagcgagtactttaactctctgaaatggatcctggagaacgaccccact
gacctggacctccgcttcaccatcgacgaggagctctttggacagacgcaccagcacgag
ttaacaccaggtggcgccgacgtcgtcgtcaccgactccaacaagaaagagtacatccac
ctcgtgatgcagtggagatttgtgaaccgggtccagaagcaaatgtccgccttcaaggag
ggcttctacgagctcatcccgcaggacctgatcaagatcttcgacgagaacgagctggag
ctgctgatgtgcggtttgggggacgtggacgtcaacgactggagggaaaacaccaagtat
aagaacggctacgggccgaaccagcccgtcatccagtggttctggaaggctgtgctgctg
atggatgctgagaagcgaatccggttgctgcagtttgtgacggggacgtctcgcgtgccg
atgaacggttttgcagagctctatgggtccaacgggccgcagttattcaccatcgagcag
tgggggacccgagacaaactgccccgggctcacacgtgctttaaccgtctggacctgcct
ccgtacgagtcgttcgaggagctccgagagaagctgaacatcgccatcgagaacactcag
ggcttcgacggcgtcgactag
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