KEGG   Ictalurus punctatus (channel catfish): 124629002
Entry
124629002         CDS       T04658                                 
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG10 isoform X1
  KO
K17888  ubiquitin-like-conjugating enzyme ATG10
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04136  Autophagy - other
ipu04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    124629002
   04136 Autophagy - other
    124629002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    124629002
   04121 Ubiquitin system [BR:ipu04121]
    124629002
   03029 Mitochondrial biogenesis [BR:ipu03029]
    124629002
Membrane trafficking [BR:ipu04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    124629002
Ubiquitin system [BR:ipu04121]
 Ubiquitin-conjugating enzymes (E2)
  UBL-conjugating enzymes
   124629002
Mitochondrial biogenesis [BR:ipu03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    124629002
SSDB
Motif
Pfam: Autophagy_act_C HTH_32
Other DBs
NCBI-GeneID: 124629002
NCBI-ProteinID: XP_047016597
UniProt: A0A979F981
LinkDB
Position
16:complement(8960979..9011567)
AA seq 302 aa
MMASGEESNISSYYLDEKAFHLCCKLFLQHSGVIRDGWSWAEVKGGEEGYIKKTAIMPGR
FCSLLNHNADDKMSALTQADELDDEAAAACTVCESQVLMHYEYHVLYSFSHQVPILYFRA
STLDGQPLSLDEVWINIHPNYRQRLLQGPWDTLTQQEHPLLGQPFFMLHPCHTEELMRPL
IIMADAKKRWSTEVSMQLKNPIIKLKNKTDLSERQQKLQEWPIQQFGTFLRKEECTAELS
NTKRPGRPQKTTKVDDHRILSWLKKNPFTTSKQVKNTLEEESELHCHMAECGRACGGIGC
AT
NT seq 909 nt   +upstreamnt  +downstreamnt
atgatggcaagtggagaagagtcaaacatttctagctactacttagatgagaaggctttc
catctctgctgcaaacttttcctacaacactcaggtgtcataagagatggatggagctgg
gcagaggttaagggtggtgaagaaggctacataaaaaagactgctataatgcctggaaga
ttctgttctttgcttaaccacaatgctgatgataagatgagtgctctgacacaagcagat
gagctggatgatgaggcagctgcggcttgtacagtatgtgagagccaggttttaatgcac
tatgaataccatgttttatactccttcagtcatcaggtgcctatactctacttcagagca
tctacattagatggacagcctttgtcccttgatgaggtttggatcaatattcacccaaac
tacagacaaagactactacaaggaccttgggatacactgactcaacaggaacacccttta
ctaggccagcccttctttatgctccatccttgtcacactgaggagcttatgagaccactt
atcataatggcagatgccaaaaaaaggtggtccacagaggtgtcaatgcaattgaagaac
cccatcattaagctgaaaaacaaaacagacctatcagagagacagcagaaacttcaggag
tggccaattcaacaatttggtacattcttaagaaaggaggaatgcactgctgagcttagc
aacaccaaaaggcctggaagaccacagaagacgactaaagtggatgatcacagaattctt
tcctggttgaagaaaaaccccttcacaacatctaaacaagtcaagaacacgcttgaggag
gaaagtgaactacattgccacatggctgagtgtggtagggcctgtggtgggattggatgt
gccacttag

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