Ictalurus punctatus (channel catfish): 128628626
Help
Entry
128628626 CDS
T04658
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128628626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
Motif
Other DBs
NCBI-GeneID:
128628626
NCBI-ProteinID:
XP_017350939
UniProt:
A0A2D0T8H0
LinkDB
All DBs
Position
20:13724063..13741413
Genome browser
AA seq
625 aa
AA seq
DB search
MCSPMPEPICLVENVNGSLCVSDGAIEYLYRINQPVVVVSVVGLYRTGKSYLMNHLAGKQ
TGFALGSTIESKTKGIWMWCVPHPYKRGHTLVLLDTEGLGDVDKGDSKNDAWIFCLAVLL
SSTLVYNSRGTIDNTAVEKLHYVTELAEQIKIKSPKSRAAEFEEEEEDSQFVQFFPNFIW
TVRDFSLELVIEKKGRVTEDEYLDFALQLKKGLCKKDTNYNLPRQCIRNYFPTRKCFVFP
FPASQDKMVQLESLDESEIWPKFLNVTQRFCDYVFTASKVKTVTGGYRVTGRMFGHLVQS
YVETISSGKVPCLENAVVVMAKIENQAAVQEGLKFYQNEMEQVKSLFPVDLNKLTSEHQK
ISNMANTEFMKRSFKDEEGEYFRKLMEAVDKHYAELIAQNIEESEQKCQQILSDLYEEMN
MHVQRGEYAKPGGYKLYCTHRDNVITQYHSQPNKGIQAEVVLETFLNSKSMEAKLILQTD
EQLTESEKKIQEEKEQAALLEQQCKVEQERKMEMEQLMQEEKLLHEQRLQQLEEKFEEEN
IQQQQELERAVESKLTEQKELVRKGFEEKAQLMGLEIEQLKKEKDKQSGSVFKDYVMPLI
NTAKDVFSTFLEYKLMKNGLARSFL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagcccaatgccagagcctatttgtttggtggaaaatgtgaacggttcactgtgt
gtgagtgatggagccattgagtacctgtacaggattaaccagccggtggtggtagtgtct
gtggtgggactgtatcgcacaggaaagtcttacctcatgaaccacctggcaggaaaacaa
actggctttgctctgggcagcaccattgagtcgaagactaaaggtatttggatgtggtgt
gtgccacacccttataaaagaggacacactctggttctgctggacactgagggactgggg
gacgttgacaagggagactctaagaatgatgcctggatcttctgtctagctgttcttctc
agcagcactctggtctacaacagccgcggaaccatcgacaacacagcagtggaaaaacta
cactatgtcactgagcttgcagagcagattaagatcaaatcacctaaatccagagcagct
gagtttgaggaggaggaagaagactctcagtttgtgcagttttttcctaacttcatctgg
acagtgcgtgatttttcactggagctggtgattgagaaaaagggtcgagtgaccgaggat
gagtacctggattttgccctgcagctgaagaaaggtctttgtaagaaggacaccaactac
aatcttccaaggcagtgtattcgaaactattttccaactcgcaagtgctttgttttcccg
ttccctgcctcccaggacaaaatggttcagctcgagagcctggatgagagtgaaatttgg
cccaaatttctcaatgttacacagcgtttttgtgactacgtctttactgcaagcaaagtt
aaaacagttacaggaggatacagagtcacagggaggatgttcggtcacctagtgcagtca
tatgtggagaccatctctagtgggaaagtcccttgtctggagaatgctgtggttgtaatg
gcaaagatagaaaaccaggcagctgtgcaggaggggcttaaattctatcagaatgagatg
gaacaggtgaagagtttgtttccagtcgatttgaataaacttacttctgaacaccagaag
atcagcaacatggccaacactgaatttatgaagcgctcttttaaagatgaagagggggaa
tacttcaggaaactcatggaggcagtagataagcactatgctgagctaattgctcagaat
attgaggaatcagaacagaagtgccagcagattctgtctgatctatatgaggagatgaac
atgcacgtgcagaggggggagtatgcaaagcctggaggatataagctctattgcacgcac
agagacaacgtcattacccagtaccacagccaacccaacaagggaatccaggctgaggtg
gtgctggagacgtttctgaatagtaaaagtatggaagcaaaattaattctccagactgac
gaacaactgactgaaagtgagaaaaagattcaagaggagaaagaacaagcagctctgtta
gagcagcagtgtaaagttgaacaggagagaaaaatggagatggagcaactgatgcaggag
gaaaaattgctccatgagcaacggctacagcagctggaggagaagttcgaggaggagaat
attcagcagcagcaggagctagagagagcagtggagagtaaactgaccgaacagaaagaa
cttgttcggaaagggtttgaagagaaagcccagctgatggggcttgagattgagcaactt
aaaaaagaaaaggataaacaatctggctctgtttttaaagattatgtcatgcctctcata
aacactgccaaagatgtgttttccacattccttgaatataaacttatgaagaatggactg
gcaaggtcattcttataa
DBGET
integrated database retrieval system