Ictalurus punctatus (channel catfish): 128628657
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Entry
128628657 CDS
T04658
Name
(RefSeq) tubulin alpha-1C chain
KO
K07374
tubulin alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04145
Phagosome
ipu04210
Apoptosis
ipu04530
Tight junction
ipu04540
Gap junction
ipu04814
Motor proteins
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128628657
09143 Cell growth and death
04210 Apoptosis
128628657
09144 Cellular community - eukaryotes
04530 Tight junction
128628657
04540 Gap junction
128628657
09142 Cell motility
04814 Motor proteins
128628657
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128628657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
128628657
03036 Chromosome and associated proteins [BR:
ipu03036
]
128628657
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
128628657
04147 Exosome [BR:
ipu04147
]
128628657
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128628657
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
128628657
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
128628657
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128628657
Exosomal proteins of other body fluids (saliva and urine)
128628657
Exosomal proteins of colorectal cancer cells
128628657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
128628657
NCBI-ProteinID:
XP_017342604
UniProt:
A0A2D0SIS4
LinkDB
All DBs
Position
15:4425609..4428531
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIANIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSVEGEEEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagtgcatctctatccatgttggtcaggctggtgtccagattggcaatgcatgc
tgggagctctactgtcttgaacacggcatccagcctgacggacagatgcccagtgacaag
accattggaggtggggatgattccttcaacaccttcttcagtgagactggggctggaaag
catgtccccagggctgtgtttgtggatctggagcccactgtcatagatgaggtccgttct
ggaacataccgccagctgttccaccctgagcagcttatcacaggaaaagaggatgctgcc
aacaattacgctcgcggtcactacactattggcaaggagctgattgacctggtactggac
aggatccgcaaactggctgaccagtgcacaggtctccagggtttcctggtgttccacagc
tttggtggtggaactggttctggtttcacctccctgctgatggaacgcctgtctgttgac
tacggtaagaagtccaagctggagttctccatctacccagctccccaggtgtctactgct
gtggtggagccctacaactccatcctgaccacccacaccaccctagagcactccgactgt
gctttcatggtggacaatgaagccatttatgacatttgccgtagaaacctcgatattgag
cgccctacatacactaacctgaataggctgattagtcagatcgtgtcctccatcacggcc
tctctccgtttcgatggcgccctcaatgtcgaccttactgaattccagaccaatttggtg
ccctaccctcgtattcatttcccactggccacctatgctccagtgatctctgcagagaaa
gcttaccacgagcagctctctgtagctgaaatcacaaatgcctgctttgagccggccaat
cagatggtgaaatgtgacccacgtcacggcaagtacatggcctgctgcctgctgtaccgt
ggtgatgtggtgcctaaagatgtgaatgctgctattgcaaacatcaagaccaagcgcacc
atccagtttgtggactggtgtcccactgggttcaaggtgggcatcaactaccagcctccc
actgtggttccaggtggagacctggccaaggtgcagagggctgtgtgcatgctgagcaac
accacagctattgctgaggcctgggctcgtctcgatcacaagttcgacctgatgtacgcc
aagcgtgcctttgtgcactggtatgttggtgagggtatggaagagggcgagttctctgag
gccagagaggacatggctgccctggagaaggattatgaagaagttggtgctgacagtgtg
gagggagaagaggaaggagaggagtattaa
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