Ictalurus punctatus (channel catfish): 128635185
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Entry
128635185 CDS
T04658
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
128635185
Cell adhesion molecules [BR:
ipu04515
]
Cadherins
Protocadherins
128635185
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
7TM_GPCR_Sri
Fibulin_C
GPR180-TMEM145_TM
Motif
Other DBs
NCBI-GeneID:
128635185
NCBI-ProteinID:
XP_053542769
UniProt:
A0A9F7RH02
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Position
16:4054844..4058603
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AA seq
828 aa
AA seq
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MADFISYAACCRRMTTTQLKWQTVFFIFCVYGMDFVFCQARYSIPEEMPEGSFVGNIAKD
LGIEISRLISGKARVVTKGGRQYVDLSRDKGILVVKERIDREELCKQTTPCSFSFDLIME
NPIELHRVTVEVLDINDNAPLFIKDVVSLEISENAASGTRFPLDSAVDMDVGINAIQNYA
LSSTDNFKLEINSQDDGRKYIEMILQLELDREERDELKLVLTAYDGGSPKKSGTARIQIT
VLDTNDNAPVCKQSVYKVDVSENSPVGTLLTIVSATDADEGINGHISYTIVQASKDAREL
FKINPETGEITTLNGLDYEIETSYQLNVKARDKWGLADTCKVIVEVFDENDNSPFIQLMS
FSNIIAENSPIGTTVAVINVEDVDSGKNGLVQCKIYESQPFKIESSFSDYYALITDKTLD
RENIAEYNITILVSDQGSPAQHSNKTINVKISDVNDNPPVFSSDEYKTLVTENNSPGVAV
LTVKASDADWGPNARLSYFLEDHNIQGNPVSYLVSVNSESGVIHAIKAFDYEQMKTFSFN
VTARDGGSPPLSSEVTVTIIVEDQNDNAPQVLYPVQTGGSVVAEIVPRSADVGYLVTKVV
AVDVDSGQNAWLSYKLQKATDRALFEVGAQNGEIRTVRQVTDKDAVKQKLTVVVEDNGQP
SRSAVVNINVVVADTFPEVLSEFTDFTHAKQYNDDLTFYLVLALAAVSFLFITTVVVIIS
VKIYRWRQSRVFHHSNLPVIPYYPPGYADTGVTGTLPHLYNYDAYMTTDSRKCDSKFSTL
RAQNVLLVDPTFTETVQRAMHPKNCLDDPESPESVRCVTFYASLCLLV
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttatatcgtacgctgcttgttgccgtcggatgactacaacacagctaaaa
tggcagactgtgttttttattttctgtgtttacgggatggacttcgtcttttgtcaagcg
cgatattcgatcccagaggaaatgccagagggatcatttgtaggcaacatcgccaaagat
ttgggaatagagataagtagacttatttctggaaaagctcgggttgtaacaaagggcggc
cggcaatatgtcgatctgagcagagacaaaggcatcctcgtagtgaaagagaggatagac
cgagaggagctctgcaagcaaacaacgccttgcagtttcagctttgatctgatcatggaa
aaccccatagaactgcaccgtgtgacagttgaggtgctagacataaatgacaatgcacca
ttattcattaaagatgtcgtcagtttggaaataagcgaaaatgcagcatctgggactcgc
tttcctttagacagcgcagtagacatggatgtaggaataaatgccatccagaattatgcc
ctttcttccactgataattttaaactggaaataaatagtcaggatgatggaagaaaatat
atagaaatgattttacaacttgaactggaccgagaagaacgcgatgagctaaaattagtt
ttgactgcatatgacggaggatcacccaaaaaatcaggcacagcgcgaattcagattact
gtattagatacaaatgataatgctccggtgtgcaaacaatctgtgtacaaagttgatgtt
agtgaaaatagcccggtcggcacactcttaactatagtaagcgctaccgatgctgatgaa
ggaataaatggacatatatcatatacaattgttcaagctagtaaagatgcaagagaactg
tttaaaataaatccggaaacaggagaaattacaacattaaacgggttagattacgagatt
gaaacgagctatcaattaaatgttaaggcaagagacaaatggggcctggcagatacgtgc
aaggttattgtagaagtttttgatgaaaacgataattctccctttatacagcttatgtca
ttttcaaacatcattgcagaaaattctccaatcggaacaaccgtggctgtaattaatgta
gaagacgtagattccggtaaaaatgggctcgtgcagtgtaaaatatatgaaagccagccg
tttaaaatagaatcgtcgttttctgattattatgcattaattacagataaaactcttgat
cgagaaaatattgctgaatacaacataaccattctggtatccgatcaaggaagtcctgca
caacacagtaacaaaactatcaatgttaagatttccgatgtgaatgataatccacccgta
ttcagttctgacgagtataaaacattagttactgaaaacaactctccgggggtggctgta
ctgactgtaaaagcgagcgatgctgactggggaccaaatgcgcgactgtcgtattttttg
gaggatcataatatacagggcaacccagtgagttatttagtctcagtgaattcagagagc
ggagttatacatgcaatcaaggcctttgattacgagcaaatgaaaactttcagctttaat
gtgacagcccgagacggagggtctcctcctttaagttctgaagtcacagtgacgatcatc
gttgaagatcagaatgacaacgctcctcaggttctctacccagtacagactggtggctct
gtggtggctgagattgtgcctcgttcagcagatgtcggctatctggtcactaaagtggtg
gctgttgatgtggactctggacagaatgcctggctttcctacaaactccagaaagccaca
gacagggcgctgtttgaagtgggagcgcagaatggagagatacgaactgtgcgccaggtc
actgataaagatgctgtcaaacaaaagctcactgtagttgtggaggataacggacagcca
tctcgctcagctgtagtgaacatcaatgtagttgtagcggacactttccctgaagtgctc
tcagaattcaccgactttacgcacgccaaacaatataacgatgacctcaccttttattta
gttttagcattagctgctgtttctttccttttcatcacaactgtagtagttataatatca
gtaaagatctacaggtggagacaatcgcgcgtcttccatcactccaatcttccagtaatt
ccgtactatccacccggttacgcagacacaggagttactggaactctgccgcacttgtat
aattatgatgcttatatgacgactgactcgagaaagtgtgactcaaagttttccacacta
agagctcaaaatgttttattggtggatccgactttcaccgagactgtgcagcgagcaatg
catccaaagaactgtttagatgatccagaatctccagaatcggtaagatgcgtcactttt
tatgcatcactttgtttattggtgtag
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