KEGG   Ictalurus punctatus (channel catfish): 128635185
Entry
128635185         CDS       T04658                                 
Name
(RefSeq) protocadherin beta-16-like
  KO
K16494  protocadherin beta
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ipu04515]
    128635185
Cell adhesion molecules [BR:ipu04515]
 Cadherins
  Protocadherins
   128635185
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th 7TM_GPCR_Sri Fibulin_C GPR180-TMEM145_TM
Other DBs
NCBI-GeneID: 128635185
NCBI-ProteinID: XP_053542769
UniProt: A0A9F7RH02
LinkDB
Position
16:4054844..4058603
AA seq 828 aa
MADFISYAACCRRMTTTQLKWQTVFFIFCVYGMDFVFCQARYSIPEEMPEGSFVGNIAKD
LGIEISRLISGKARVVTKGGRQYVDLSRDKGILVVKERIDREELCKQTTPCSFSFDLIME
NPIELHRVTVEVLDINDNAPLFIKDVVSLEISENAASGTRFPLDSAVDMDVGINAIQNYA
LSSTDNFKLEINSQDDGRKYIEMILQLELDREERDELKLVLTAYDGGSPKKSGTARIQIT
VLDTNDNAPVCKQSVYKVDVSENSPVGTLLTIVSATDADEGINGHISYTIVQASKDAREL
FKINPETGEITTLNGLDYEIETSYQLNVKARDKWGLADTCKVIVEVFDENDNSPFIQLMS
FSNIIAENSPIGTTVAVINVEDVDSGKNGLVQCKIYESQPFKIESSFSDYYALITDKTLD
RENIAEYNITILVSDQGSPAQHSNKTINVKISDVNDNPPVFSSDEYKTLVTENNSPGVAV
LTVKASDADWGPNARLSYFLEDHNIQGNPVSYLVSVNSESGVIHAIKAFDYEQMKTFSFN
VTARDGGSPPLSSEVTVTIIVEDQNDNAPQVLYPVQTGGSVVAEIVPRSADVGYLVTKVV
AVDVDSGQNAWLSYKLQKATDRALFEVGAQNGEIRTVRQVTDKDAVKQKLTVVVEDNGQP
SRSAVVNINVVVADTFPEVLSEFTDFTHAKQYNDDLTFYLVLALAAVSFLFITTVVVIIS
VKIYRWRQSRVFHHSNLPVIPYYPPGYADTGVTGTLPHLYNYDAYMTTDSRKCDSKFSTL
RAQNVLLVDPTFTETVQRAMHPKNCLDDPESPESVRCVTFYASLCLLV
NT seq 2487 nt   +upstreamnt  +downstreamnt
atggctgattttatatcgtacgctgcttgttgccgtcggatgactacaacacagctaaaa
tggcagactgtgttttttattttctgtgtttacgggatggacttcgtcttttgtcaagcg
cgatattcgatcccagaggaaatgccagagggatcatttgtaggcaacatcgccaaagat
ttgggaatagagataagtagacttatttctggaaaagctcgggttgtaacaaagggcggc
cggcaatatgtcgatctgagcagagacaaaggcatcctcgtagtgaaagagaggatagac
cgagaggagctctgcaagcaaacaacgccttgcagtttcagctttgatctgatcatggaa
aaccccatagaactgcaccgtgtgacagttgaggtgctagacataaatgacaatgcacca
ttattcattaaagatgtcgtcagtttggaaataagcgaaaatgcagcatctgggactcgc
tttcctttagacagcgcagtagacatggatgtaggaataaatgccatccagaattatgcc
ctttcttccactgataattttaaactggaaataaatagtcaggatgatggaagaaaatat
atagaaatgattttacaacttgaactggaccgagaagaacgcgatgagctaaaattagtt
ttgactgcatatgacggaggatcacccaaaaaatcaggcacagcgcgaattcagattact
gtattagatacaaatgataatgctccggtgtgcaaacaatctgtgtacaaagttgatgtt
agtgaaaatagcccggtcggcacactcttaactatagtaagcgctaccgatgctgatgaa
ggaataaatggacatatatcatatacaattgttcaagctagtaaagatgcaagagaactg
tttaaaataaatccggaaacaggagaaattacaacattaaacgggttagattacgagatt
gaaacgagctatcaattaaatgttaaggcaagagacaaatggggcctggcagatacgtgc
aaggttattgtagaagtttttgatgaaaacgataattctccctttatacagcttatgtca
ttttcaaacatcattgcagaaaattctccaatcggaacaaccgtggctgtaattaatgta
gaagacgtagattccggtaaaaatgggctcgtgcagtgtaaaatatatgaaagccagccg
tttaaaatagaatcgtcgttttctgattattatgcattaattacagataaaactcttgat
cgagaaaatattgctgaatacaacataaccattctggtatccgatcaaggaagtcctgca
caacacagtaacaaaactatcaatgttaagatttccgatgtgaatgataatccacccgta
ttcagttctgacgagtataaaacattagttactgaaaacaactctccgggggtggctgta
ctgactgtaaaagcgagcgatgctgactggggaccaaatgcgcgactgtcgtattttttg
gaggatcataatatacagggcaacccagtgagttatttagtctcagtgaattcagagagc
ggagttatacatgcaatcaaggcctttgattacgagcaaatgaaaactttcagctttaat
gtgacagcccgagacggagggtctcctcctttaagttctgaagtcacagtgacgatcatc
gttgaagatcagaatgacaacgctcctcaggttctctacccagtacagactggtggctct
gtggtggctgagattgtgcctcgttcagcagatgtcggctatctggtcactaaagtggtg
gctgttgatgtggactctggacagaatgcctggctttcctacaaactccagaaagccaca
gacagggcgctgtttgaagtgggagcgcagaatggagagatacgaactgtgcgccaggtc
actgataaagatgctgtcaaacaaaagctcactgtagttgtggaggataacggacagcca
tctcgctcagctgtagtgaacatcaatgtagttgtagcggacactttccctgaagtgctc
tcagaattcaccgactttacgcacgccaaacaatataacgatgacctcaccttttattta
gttttagcattagctgctgtttctttccttttcatcacaactgtagtagttataatatca
gtaaagatctacaggtggagacaatcgcgcgtcttccatcactccaatcttccagtaatt
ccgtactatccacccggttacgcagacacaggagttactggaactctgccgcacttgtat
aattatgatgcttatatgacgactgactcgagaaagtgtgactcaaagttttccacacta
agagctcaaaatgttttattggtggatccgactttcaccgagactgtgcagcgagcaatg
catccaaagaactgtttagatgatccagaatctccagaatcggtaagatgcgtcactttt
tatgcatcactttgtttattggtgtag

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