Imperialibacter roseus: RT717_00840
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Entry
RT717_00840 CDS
T09469
Name
(GenBank) cadherin domain-containing protein
Organism
iro
Imperialibacter roseus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
RCC1
RCC1_2
Por_Secre_tail
Cadherin_CELSR2_9th
Cadherin_4
InlK_D3
Motif
Other DBs
NCBI-ProteinID:
WOK07166
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Position
218680..222339
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AA seq
1219 aa
AA seq
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MKNRLAIAAFLVNLAFTAFSQPVIKPDQILTIDENSAEGVEVGSVKITHSYINQITSTNQ
TTHLLKTDGSLWSWGYNFDGVSGIGTNVETLIPTKVGTENNWQSVDQGVGFAVGTKTNGE
VFAWGVEYYGDENTETDYDLNTFFTAVKVTGTSDWDMVAAGYICQLGIKQDGTIWFWGGS
NRGESGIGSSNFSSKTPVQIGADTDWKFVDSEIWVNYALKSNGTLWSWGAVYGSNLGLGI
TDTNIDVTAPTQVGSDADWKIVAGDEYTAYGIKDDGTLYKWGSTVNQFGSDADWADVEYY
GAGNGNRAIGLKTNGTLWAWGKNDKGQVGDGTTTDRDLPVQIGTDTDWVKIGESFAIKED
GSLWAWGINGHGQLGTETTTNLTTPTYIPPVGMRFEITAGNESGAFSVTDRGVIKVADAS
KLDFETSASYELTITATDDNQTSAEESVTINLNNINDGPVIDADQSVSLDENTENGTEVI
AVVASDQDGDTVFENWTITSGNDSEAFAIDAETGIITVAGQAKLNFEEVSSFLIGVTVSD
GTTVGSEGFLNITIVDKNEAPVVAAEQTGTVDENSLAGTEVALITATDEDAGAGLSNWQI
SSGNANGAFAINAATGQISVADGNQLDFETTPTIEIGVTVSDGTLTSSEAVVVITILDVN
DPPIITVDQEGIIPENSANGTEVMQVQAAGGNTNTILKSWAITQGNIDGAFAVDPESGLL
TVADGTKLNYEARPTYALELTVSDGVNVSEPRLVAISLSNVNEAPTGVSMSASAIDENLP
VGSLVATLATADVDASDTFVYAFVEDGNANDNDSFVIASNQLLAKEKFDYEAKSNYTVRI
KSTDAGGLSTEAQLAIGVNNINDVTLTTALSGPFCDEDSDGEIDLMISDAAPPLQIIWST
GSTDEDLVGLSAGNYDVTVTDSNGHSASATIELGTKAVYQPTIGLVTSDETGIRNKVVWD
ASESYNVNKFLIYRETSTAGEYEQIGFVESGSTTEFIDSESDARTQSYKYKVGVLDNCGT
EGGLGDFHKTLHLTSSVGLDNSVNLSWNQYIGVDYSTISLYKGEGSAEKTLLTSLSASNN
SFTDLDVEPDKVYQYVLEIVLNEPVSNSAIEETNSFRNNTTYTSIRSNNLVVRGVALGVR
DEVRSTIYPNPSTGVININTNRGGKKKLVIKDLSGNVLRTFYSLDQMIELDVSFLKEGLY
LMQIDSEKSEFIRFFKRDE
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatagattagcaattgccgcatttttggtgaaccttgcctttacggcgttttcc
cagcctgttattaaacctgatcaaatattgaccattgacgaaaactccgcagaaggagtt
gaggttgggtcagtgaagataacccacagttatatcaatcaaatcactagcaccaaccaa
accactcatctcctgaagacagacggatccctttggtcatggggttacaattttgatgga
gtctctgggattgggacgaatgtcgaaacactgatacctacaaaagttggtactgaaaat
aactggcaatcggtggaccagggcgtaggttttgcggtcgggacaaaaacaaacggagaa
gtatttgcatggggagttgagtattatggagatgaaaacacagaaaccgattacgatctg
aatacattctttactgcagttaaagtgaccggtaccagcgattgggacatggttgctgct
ggatatatttgtcaactaggaattaagcaggatggaaccatttggttttggggcggatcc
aacagaggagagtcgggaattggatcgtcgaatttttctagcaaaacaccagtccagatt
ggcgcagacactgactggaaattcgtagactctgaaatttgggtgaattatgcgttgaag
tccaacggtaccctttggtcttggggtgcggtttatgggtcgaacctggggctgggaatc
acagatactaacattgatgtgactgcgccaacccaagttggttctgacgctgactggaaa
attgtagcaggggatgaatatacggcctatgggatcaaagatgacgggacactttacaaa
tggggcagcactgtcaaccagtttggttccgatgccgattgggctgatgttgagtactac
ggagcgggaaatggcaatagagccattggtctaaaaaccaatggaactctctgggcctgg
gggaaaaacgacaaggggcaggtaggggatggcaccactactgacagggacttgcctgtg
cagataggaactgacaccgactgggttaaaatcggagaaagttttgccatcaaggaagat
ggatcactttgggcctggggtatcaatggccatgggcagttgggaacagaaacgactact
aacctgactactccgacttacatcccgccggtaggcatgcggtttgaaattacggcaggg
aatgaaagtggtgcattttcagttaccgaccgtggggtgataaaagtggcagatgcttcc
aagctggacttcgagaccagtgcttcctatgagcttacaattacagccaccgacgacaac
caaaccagtgctgaagaatccgtcaccattaatttgaacaatataaatgatgggccggtg
attgatgcagaccagagtgtctcgttagacgaaaatactgagaatggaactgaagtaatt
gcagttgtggcatcggatcaggatggcgacactgtatttgaaaattggacgatcaccagt
ggcaacgactcagaagcatttgcaattgatgcagaaacaggcatcattactgtcgctggt
caggcaaagctcaactttgaagaagtttcgtccttccttattggggtaaccgtgagcgat
gggacgacggttggttccgagggttttctaaacataacaattgtagataaaaatgaggcg
cctgtagtggcagccgaacagacaggcactgtggatgagaacagcctggccgggactgaa
gttgccttgataactgcgacagatgaagacgctggagctggcctgagcaactggcagatc
tccagtggcaacgcaaatggagctttcgccataaatgccgccaccggacaaatttctgtc
gctgatggtaatcagctcgactttgaaactaccccgacaatagaaataggagtgactgtt
tccgatggcacgcttacgagcagcgaggcagtggtagttatcactatcctggacgtgaac
gatccgcccatcatcactgtagatcaggagggtattattcccgaaaacagtgccaatggc
accgaagtgatgcaggtacaagcagccggaggaaacacaaataccattttaaaaagctgg
gcaatcacccagggaaatattgatggagcgtttgctgttgaccctgaaagcggtttgtta
actgtggccgacggcacaaagctcaactacgaagcacgaccgacttatgcgctggagcta
acggtttccgatggagtcaatgtgagcgaaccaaggctggtggccatctcgttgagcaat
gtcaatgaagccccgacaggcgtgtcgatgtctgcttcggcaattgatgaaaacctcccc
gttggtagccttgtggccacgcttgctactgcggacgttgatgccagcgacacgtttgtg
tatgcatttgttgaagatggtaacgccaacgacaatgattcttttgtaattgcatcaaat
cagttattggcgaaagagaaatttgattatgaagccaaaagcaattacacagtccgtatc
aagtcgaccgatgctggtggcttgagtacagaagcgcaacttgccattggggtcaataat
ataaatgatgtgacattgacaacagcgctttcggggccattttgcgatgaggatagtgac
ggagagattgatttgatgatttctgatgcggcaccgccattgcaaattatatggtctact
ggaagtactgacgaggacctggtcggactttctgccggaaattatgatgtaaccgtcact
gactcaaatgggcactcggcttcagcaacgattgagctgggtaccaaagcggtttatcaa
ccaaccattggacttgtaacctcggatgagactggcatcaggaacaaagttgtttgggat
gcctccgaatcctacaatgtgaataagttcttgatttacagagagacaagcaccgcagga
gagtatgagcaaattgggtttgttgaaagtgggagtacgacagagtttattgacagtgaa
tccgatgcaagaacgcagtcctataagtacaaagtaggagttctggacaactgcggaacg
gagggcgggcttggtgactttcacaaaacgctgcacctcacaagtagtgtggggcttgat
aatagtgtcaatctttcatggaaccagtacattggagttgactattccactatcagcctc
tacaagggagagggaagtgctgaaaaaacacttttgacctcattatcggcttcaaataat
tccttcactgatttggacgttgagcccgacaaagtctaccagtatgttctggaaattgtg
ctaaacgaacctgtttctaatagtgcaattgaagaaactaatagcttcaggaacaatacc
acctatacttctataagatccaataacctggtagtaagaggcgtagcacttggtgtccgt
gatgaagttcgcagtactatatatccaaacccctcaaccggtgtaattaacataaatact
aaccgaggtggtaaaaagaagctggtgataaaagacttgagcggcaatgttttgcgcacg
ttttattcattggatcaaatgatagaactggatgtctcatttcttaaagaaggcctttat
ctgatgcaaattgatagcgaaaagtctgagtttattcggttttttaagagagacgaatag
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