Imperialibacter roseus: RT717_03305
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Entry
RT717_03305 CDS
T09469
Name
(GenBank) Smr/MutS family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
iro
Imperialibacter roseus
Pathway
iro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RT717_03305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iro03400
]
RT717_03305
DNA repair and recombination proteins [BR:
iro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
RT717_03305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
ATP-synt_B
GTP_EFTU_D2
CdiA_C
Motif
Other DBs
NCBI-ProteinID:
WOK07649
LinkDB
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Position
784659..787058
Genome browser
AA seq
799 aa
AA seq
DB search
MRVFPDTFEAKTGFDKIREMVAAKCLSSLGTRHVEKMKPSDDLKYLKRLLIQTEELRRLF
AAGNRLPDANYIDPAEQLAKMKVSGTYLEEEEAYDLKRSLSTIIQLQSVLTKHAEECPTL
HGLSGMVDLPTDIIKWFEAIIDDTGKLRANASKELMQIRASMVSEHSSLRRVMDHISKDA
QKQGWSPDDGSIAVRGGRLVIPVLAEHKRKLKGFIHDESATGQTVFMEPAEALEINNRIR
ELELEERREIIRILRNFTDQLRPHIPALEKAYHFLGAIDFIRAKALLAIEINGLLPVIDE
NPVIVWHKAVHPLLYLLHKKAQKPIVPLDIELDAERRILIISGPNAGGKSVCLKTVVLLQ
YMLQCGLLVPVRDDSVMGVFNKIFIDMGDEQSLENDLSTYSSHLTSMRFFLENAGGKTLF
LIDEFGAGTEPQFGGAIAEGVLEQLYKKQSFGVITTHYGNLKSMAEKNAGIINGAMRYDV
NQLKPLYELEVGRPGSSFALEMAANIGLSNAVIERAKGLVGHSQVKFETLINELEAAKND
FQTRYESVNRKDTELEKILKDYQDLKAHLDAEKSKIIKEAKQEAKRIVLDANKAVENTIR
EIKENKAEKEKTKEVRQKLTDIQVSLTEEVEEKKPVWTTVAGEIKVGDKVRMAGQESAGE
VVSIRGKKAEVLMGELKSHIALNRLEKVKSSSQGKKSLKRESVGGVFKGIDMNQRRADFS
PNLDLRGKRAEEAIQLVDDFIDSSVLFSMHEVRIVHGKGDGILREVIRRYLSGNKFIERM
ADEHVERGGSGVTVISFRQ
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgagggtttttcctgataccttcgaggccaaaaccggcttcgataaaatccgtgaaatg
gtggccgccaaatgccttagcagcctcggcacaaggcatgtggagaagatgaagccttca
gacgacttgaagtacctgaaaaggcttttgattcaaactgaggagcttagacggttattt
gcggcaggtaacagactgcccgacgccaactacattgatccggcggaacagcttgccaaa
atgaaggttagcggtacttacctggaggaagaagaagcctacgaccttaaacggtcactc
agcaccattattcaacttcagtctgtgctgacaaaacatgccgaagagtgcccgacgctg
cacgggttatcagggatggtagatcttcccaccgatattattaaatggtttgaggctatt
attgatgacacaggaaagctgagagccaacgcctccaaagagcttatgcaaataagggcc
tcaatggtcagcgagcattcctcgctgaggagggtaatggatcacataagcaaagacgca
caaaaacaggggtggtcgcccgacgatggttccattgccgtaaggggcgggcgtttggtt
attccggtgctggcagaacacaagcgcaagctgaaaggatttattcatgatgagtcagca
acaggacaaactgtgtttatggagccggccgaggccctggagatcaacaaccgtataagg
gagctggagctggaagaaagaagggaaatcatccgaattcttagaaatttcactgatcaa
ttaaggcctcatattcctgcgctggaaaaagcttaccattttcttggtgcgattgacttt
atacgggcgaaggctttgcttgccatcgaaatcaatggcttgctgcctgtcatagacgaa
aatccggtcattgtttggcacaaggcggttcatcctcttctttatcttttgcacaaaaag
gcccaaaagcctattgttcctctggatattgagcttgatgcagaaaggcgcattctgatt
atttcggggccaaatgccggcggcaagtcggtgtgcctgaaaaccgtcgtcttattgcaa
tacatgctacagtgcggtctcttggtacccgttagagacgactcggtcatgggggttttc
aataagatcttcatcgatatgggcgatgaacagtcgctggaaaatgacctaagtacctac
agttctcacctcacttcgatgcgttttttcctcgaaaatgcaggagggaagacattgttt
ctgattgatgagtttggcgctggcaccgagccgcagtttggtggagctattgcggagggc
gtgctggagcaattgtacaaaaagcaatcctttggagtgattactacgcattatggcaat
ctgaagagtatggctgagaagaatgcaggcatcatcaacggggctatgagatacgatgta
aatcagttgaagcctttgtatgaactggaagtgggacgaccagggagctctttcgccttg
gaaatggccgcaaatattgggctgtcaaatgcggtgatcgaaagggcgaaaggccttgtt
gggcattcgcaggtgaagtttgaaacgctcatcaacgagttggaagccgctaaaaatgat
tttcaaaccaggtacgagagtgttaaccgaaaggacactgagcttgaaaaaatactcaaa
gactaccaggacctgaaagctcatttggatgcagaaaagagcaagattattaaggaagcc
aagcaggaagccaagcgaattgtactcgacgccaataaagcggtagaaaatactatcagg
gagataaaagaaaacaaggccgaaaaggaaaagacaaaagaagtgcgccaaaagctcaca
gatatacaagtttcgctgactgaggaagtggaggagaaaaagcctgtatggacaactgtg
gctggcgagataaaagtaggcgacaaggtcaggatggccgggcaggagtcggctggtgaa
gtggtctccattcggggaaagaaagcagaagtgctcatgggagagctaaaatctcacatt
gcactcaaccgtcttgaaaaagtaaaatcgtcgtcccaggggaaaaagagcttgaagcgg
gagagcgtaggtggcgtctttaaggggatcgacatgaaccaaagaagggccgacttttcc
cccaatcttgacctcagaggaaagagagccgaagaagctattcagttagttgacgatttt
atagatagttcagtgcttttcagcatgcacgaggtgaggatcgtacatggcaagggcgac
ggcattctcagagaagtgatcaggcgctacctgagtggcaataagttcattgagcggatg
gccgacgaacatgtggagagaggcggtagtggggtcacagtcatcagcttcagacaataa
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