Imperialibacter roseus: RT717_04295
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Entry
RT717_04295 CDS
T09469
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
iro
Imperialibacter roseus
Pathway
iro02024
Quorum sensing
iro03060
Protein export
iro03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RT717_04295 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RT717_04295 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RT717_04295 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
iro02044
]
RT717_04295 (ffh)
Enzymes [BR:
iro01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
RT717_04295 (ffh)
Secretion system [BR:
iro02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RT717_04295 (ffh)
Eukaryotic Sec-SRP protein
RT717_04295 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
AAA_16
CLP1_P
nSTAND3
AAA_30
ParA
Zeta_toxin
APS_kinase
cobW
MeaB
ATP_bind_1
KTI12
NTPase_1
AAA_31
AAA_18
ATPase
AAA_17
ATPase_2
AAA_33
KAP_NTPase
AAA_14
Thymidylate_kin
ArsA_ATPase
YqeC
ResIII
NPHP3_N
Fer4_NifH
DO-GTPase1
MobB
AAA_19
MMR_HSR1
NACHT
Sigma54_activat
TsaE
ABC_tran
SLFN-g3_helicase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
WOK07846
UniProt:
A0ABZ0ISW2
LinkDB
All DBs
Position
complement(995843..997168)
Genome browser
AA seq
441 aa
AA seq
DB search
MFDSLSVKLDRAIKTLKGQGKISEINVASTIKEIRRALVEADVNYKVAKEVTDGIKEKAL
GRDVLIAVSPGQLLTKIVHEELTSLMGGSQADINITGDPAVILISGLQGSGKTTFTGKLA
NRLKKQGRQVLLVACDIYRPAAIDQLKVLGEQVGVEVYAEPENKNALQIAQNGIAQAKKT
GKKIVIVDTAGRLAVDDQMMAEIEGLKKSLKPTETLFVVDSMTGQDAVNTAKTFNERLNF
DGVVLTKLDGDTRGGAALSIRAVVDKPIKFISTGEKMDAIDLFHPDRMAQRILGMGDVVS
LVEKAQEAFDQQEADRINKKIRKNQFGFDDFLSQIDQIKKMGNIKDLMGMIPGMGKALKD
VDVDDDSFKPIEAIIKSMTPKERENPDLINGSRRQRIAKGSGTSVQEVNNLMKQFEQMRK
MMKTMNKMGGAKAALGNMMRR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatagtttaagtgtaaagctcgacagagcgattaagaccctcaaaggtcaggga
aaaatatcagagattaacgttgccagcacgatcaaagaaatccgtcgtgcgctggtagaa
gccgacgtaaactataaagtagccaaagaagtaactgacggcatcaaagaaaaggccctt
ggccgtgatgtgcttattgctgtttctccgggccagttgctgaccaaaattgtgcacgag
gagctcaccagcctcatgggcggctctcaggccgatatcaacatcactggtgatccggca
gtgattcttatatcaggtttgcagggttctggtaagacgaccttcactggcaagctagcc
aacagattgaaaaaacaaggtcgccaggtactgctggtggcttgcgatatttatcgtcct
gcggcaatcgaccagttgaaagtgctgggcgagcaggtaggcgtagaggtatatgcagag
cctgaaaacaaaaatgctcttcagattgcccagaatggtatcgcacaagcgaagaagaca
ggcaagaaaatagtgattgtcgatacggccggtcgtttggctgtcgatgaccaaatgatg
gcggagattgaaggtctgaaaaaatcgctcaagcccactgaaacgcttttcgtagtcgac
tcgatgacaggtcaggacgctgtaaacacggccaaaaccttcaacgaaagactcaacttt
gacggcgtagtgttgactaagctggacggtgacacacgtggtggtgcggcactgtctatc
agggccgtggttgacaagcctatcaagtttatttccacgggcgagaaaatggatgccatc
gacctgttccaccccgacaggatggcccagagaatcttgggtatgggtgacgtggtttca
ttggtagaaaaggcccaggaagccttcgatcaacaggaagccgacaggatcaataaaaag
atccgcaaaaaccaatttggctttgatgacttcctttctcaaatcgatcagatcaaaaag
atgggtaacatcaaagacctgatgggtatgattccaggcatgggaaaagccctgaaggat
gtggatgtcgatgatgattcattcaaacctattgaggcgatcattaagtcgatgacacct
aaggagagagaaaatccggatctcatcaacggcagccgccgtcagcgcattgccaaggga
agtggcaccagcgttcaggaggtgaacaacctgatgaagcagtttgagcaaatgcgcaag
atgatgaaaacgatgaacaaaatgggaggagcaaaagcggcgctgggcaacatgatgagg
cgctaa
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