Imperialibacter roseus: RT717_09295
Help
Entry
RT717_09295 CDS
T09469
Name
(GenBank) High-affnity carbon uptake protein Hat/HatR
Organism
iro
Imperialibacter roseus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
nSTAND1
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
NBCH_WD40
Beta-prop_DCAF4
Cytochrom_D1
Ge1_WD40
RMC1_N
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
PROPPIN
eIF2A
Beta-prop_SPT8
DUF5114
KNTC1_N
DUF7165
AAA_29
RsgA_GTPase
SRP_SPB
ABC_tran
SID-1_RNA_chan
Motif
Other DBs
NCBI-ProteinID:
WOK08829
LinkDB
All DBs
Position
2210959..2214141
Genome browser
AA seq
1060 aa
AA seq
DB search
MSASNLTPNESDGRPEQVSTGAVTRGDTTTLFNPFPGLRPFGVEESHLFFGREGQSDEVL
VKLAENRFSAVLGSSGSGKSSLMYCGLIPTLYGGFMTQAGSNWKIVVLRPGGGPIDNLAE
SLVEKDDEYAGLEEEERLIRKTITATVLRSSSLGLVEAVKQLKKSEDENILILVDQFEEL
FRYKKTESMTSSQDESSAFVNLLMEAVHQFDEPIYVTITMRSDFIGECAVFPELTQMIND
SHYLIPQMTRDQKRLAIEGPVAVGGGTIAPRLVQQLLNDVGDNPDQLPILQHSLMRTWSF
WADNHREAEAMDIRHYNAIGTLKEALSQHANEAYDMLSKREKQICETMFKALTERGSENQ
GIRRPTKLSVIASIAGVTEDEVYRVVDKFREPGRSLLMPPHGKQLESETVIDISHESLMR
IWTRLKSWLDEESRSAEMYLKLSESAGRYQEGRAGLWKMPDLQLALNWQEENRPTLVWGQ
RYNTAYERTIVFLETSKRAYETEQRNKELLQKRQIRRSRIFALVLAGAALVCIFMMIYAF
ILAAEATKQTVIAEQQAELAQKNADEAQIQSEAAQKSAKEANDQREKAEIATTQAIEQKN
EADQQRRNAEAATLLAEAARKDAVIAQDEAVKQAEIANEQKDLATAARVQADEARKNAED
LRYQAIAQSMAIKTAQVKDTTLKTLIAMQAFNFFREYSDKPYNGDIYEGLYNAWKGEEGE
NVVKWAGHTAGVRSVVFSKDGKIMYSAGADGRVLRWDMTNDKREGIDLLPRPNSSVNRVV
AVSPDERYVAVGNDAPDNNIQLIDLRNPDSPKFLKGHNGIVNDLVFFPDASGFVSVGVDG
SIKKSDFATFTSIATPGGKIEKIAISPDGKVLAAGSVDGSILLYELSNNNLLATLNVKTE
SPVTSLAFSGNGQYLAFGDLAGKITIQDIIAKKTLAELNGHESKVADLRFNNLNTLLASA
GWDGTAKLWVMKDIFDLPITLRDHGKYVNSVSFSPDGHKLATASFDNFVRVWPTRPDEIA
DKLCPDVDRNMNQTEWNQYVGGDIEYEITCIDYPSGVENK
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctagcaaccttacccccaatgagtccgatggaagacctgaacaggtttccaca
ggagccgtaacgagaggcgacaccacaactctcttcaatccgttccctggccttcggccc
tttggcgtggaggaatctcaccttttctttggccgtgaaggccagagtgacgaagtgctg
gtaaagctggcagaaaaccggttttctgcggtgctgggatcttcaggaagcggtaaatcg
tcattgatgtattgtggattgattccaacgctctatggcggattcatgacacaggcaggc
tccaactggaaaattgtggtgttgcgaccgggcggggggccgatcgacaacctggctgag
tcgctggtagaaaaggacgacgaatatgcaggactggaagaagaagaacggctgataaga
aagacaatcaccgctactgttcttagaagcagttcgctcggattggttgaagcagtaaag
caattgaaaaaatcggaagatgagaatatcctgatccttgtcgatcagtttgaggaactt
ttccggtataagaagactgaaagcatgacgtcgtctcaggacgagtcctctgcgttcgtg
aaccttttgatggaggcagtgcaccagtttgatgagcccatttatgtcaccatcactatg
cgttcagactttatcggtgaatgcgctgtttttcctgagttgactcagatgatcaacgac
agccactatctgattcctcaaatgacaagggaccagaaaaggctggcgattgaaggcccg
gtggccgtgggcgggggcaccatagcacctcgtttggtacagcagctgttgaacgacgtg
ggagacaaccccgatcagctgcccatcttgcagcactcgttaatgcgtacctggtcattc
tgggccgacaatcacagggaagccgaggcaatggacattaggcattataatgccatcggt
accctgaaggaagccttgtcgcagcatgccaacgaggcctacgacatgctttccaaacgg
gaaaagcagatttgcgaaaccatgttcaaggcgcttaccgagcgtggttctgaaaaccag
gggataagaaggccaaccaagctaagcgtcatcgcatccattgccggtgtaaccgaggat
gaggtgtaccgggtggtcgataaattccgggagccgggcaggtctttactgatgccacct
catggcaaacagctcgaatctgagactgtaattgatatttcgcatgaaagcttgatgcgc
atctggacgaggctgaagtcatggctggatgaggaaagccgttcagcagaaatgtacctt
aagctgtctgaatcggccggaagataccaggaaggacgggccggtctgtggaaaatgccc
gacttgcaactggcactcaactggcaggaggagaacaggcctacgctggtgtggggtcaa
aggtataacacagcttacgagcgcacgattgtgttccttgagacgagcaagcgagcctac
gaaaccgagcaaagaaacaaagagcttctacagaagaggcagatacgccggtccaggatc
tttgcacttgtgctggctggtgctgcgctggtgtgtatttttatgatgatttatgcgttt
attttggcggctgaagcgaccaaacagacagtcatagccgaacaacaggctgagttagca
cagaaaaatgccgatgaggctcaaatccaatcggaggcagcccagaagtccgcaaaagag
gctaacgatcaacgggaaaaggccgagatagccacgacccaggcgattgaacaaaaaaac
gaagcagatcaacaaagaagaaatgcggaggctgccacattactggctgaggctgccaga
aaggatgcagtgattgcacaagatgaagccgtaaagcaagcagagattgccaacgagcaa
aaggatcttgccaccgctgccagagtacaagcggacgaagcgaggaaaaatgcggaagat
cttcgttaccaggccattgcccagtcgatggcgattaaaacagctcaggtaaaggacacc
acactaaagacattgattgccatgcaagctttcaacttctttagagagtacagtgacaaa
ccttacaacggagacatttatgaaggtttgtacaacgcatggaaaggagaagagggagag
aatgtagttaagtgggctggtcatacagctggcgtaagatcagtggtctttagcaaggac
ggaaaaatcatgtattctgcaggtgccgatggtagggttttgcgatgggatatgaccaat
gataaaagggaggggatagatttacttcccaggcccaattcctcagtcaacagagtggtc
gctgttagccctgatgaaaggtacgtggccgtgggcaacgatgcacccgataataatatt
caactgattgaccttcgaaacccggatagccccaaatttttgaagggacacaatggtatc
gtgaacgaccttgtgttctttccagacgccagtggttttgtttcggtgggagttgatgga
agtattaaaaagagcgattttgctacattcacttcaatagctacacctggcgggaagatc
gaaaagatagcaattagtccggatggtaaggtacttgctgctggcagcgttgacggcagc
atattgctctatgaattatcaaacaacaatttgcttgcaactcttaacgtaaaaaccgag
tctccggtgacgtcacttgcctttagtggaaatgggcaatacctggcttttggcgatttg
gcgggtaaaattactattcaggatattattgcaaagaaaaccctggcagagttaaatgga
cacgaaagtaaagtagcggatttacgcttcaacaatctgaatacattactagcgtctgca
ggctgggatggtacagccaagctttgggtgatgaaagacatctttgacttgcccattact
ttgagggatcacgggaaatatgttaactctgtttcattctctcccgatggtcacaaattg
gcaacagcatcctttgataattttgttcgggtttggcccacccgaccagatgaaatagct
gacaagctttgccctgatgttgacagaaatatgaatcaaacggagtggaatcaatatgta
ggcggtgatatcgagtacgagattacgtgtatagattatccaagtggggttgaaaacaaa
tag
DBGET
integrated database retrieval system
