Imperialibacter roseus: RT717_10440
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Entry
RT717_10440 CDS
T09469
Name
(GenBank) lipid A deacylase LpxR family protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
iro
Imperialibacter roseus
Pathway
iro00540
Lipopolysaccharide biosynthesis
iro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RT717_10440
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
iro01005
]
RT717_10440
Lipopolysaccharide biosynthesis proteins [BR:
iro01005
]
Lipid A
RT717_10440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
WOK09053
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All DBs
Position
2507992..2508960
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AA seq
322 aa
AA seq
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MARKINFLLCLVFGFQGWAWGGHVVTGSGSDSTFVRQVQLTVDNDAYFFTSYDRYYSSGI
FGSYSSLRSRLPFSHPKEGSKYSSDIVFSHYIYTPKNILWDKLEQLDRPYAGMATLGVQL
NYLRPSSAFTMKADVGWLGPAIKTAELMRWWHGSLGIRLPRGWDYQINNTPVLTLTPSYL
KQWAFSEKFDLVSSTSMSAGTVINQVSQEVVVRYGLPGSLNQSHLTNSLLNTAKGSGKLI
EWYLVACWQGSYVLYNATIDGNFIGPESMYHESSEKAVLRQTYGAVLAYKKADFELSFKT
TSREVKGAENHRYMRAKISYRF
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaaagatcaattttcttttatgtttagtgtttgggtttcaggggtgggcgtgg
gggggccatgtcgtcactggaagcggttcggatagcacgtttgtgagacaggttcagctc
accgttgacaacgatgcatacttcttcactagttatgaccggtactactcaagtggcata
tttggatcctacagtagtttgaggagccgactacctttcagccacccaaaagaaggtagc
aaatactcttccgatattgttttctctcattacatctacacgcccaaaaacatcctgtgg
gacaagttagagcagcttgaccgaccttatgccgggatggctaccctgggagttcaactg
aattatctcagaccatcaagtgcttttaccatgaaagcggatgtgggttggcttggcccg
gcgattaaaacagcagagctgatgcgctggtggcacggcagcctgggcatacggcttccc
aggggttgggattaccagattaacaatacgccggtgttgactttgacaccttcctattta
aagcaatgggcgtttagtgaaaagtttgacttggtgagctccacatcgatgtcggcaggc
acagtgatcaatcaggtgtcgcaggaggtggtagtaaggtatggcttgccagggagtttg
aaccaaagccatttaactaacagtcttttgaatacagcaaaggggagtggcaagctcatt
gagtggtacctggtggcatgctggcagggaagttacgtgctttataatgccaccatagat
ggtaactttatcggaccggagagcatgtaccatgaaagctcggaaaaagcggttttgcgt
caaacctacggcgctgtgttggcttacaaaaaggctgacttcgagttgtcatttaaaact
acgtccagagaagtgaaaggagctgaaaaccaccgatatatgcgggctaaaattagctat
agattctaa
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