Imperialibacter roseus: RT717_11345
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Entry
RT717_11345 CDS
T09469
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
iro
Imperialibacter roseus
Pathway
iro03030
DNA replication
iro03430
Mismatch repair
iro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RT717_11345 (dnaE)
03430 Mismatch repair
RT717_11345 (dnaE)
03440 Homologous recombination
RT717_11345 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iro03032
]
RT717_11345 (dnaE)
03400 DNA repair and recombination proteins [BR:
iro03400
]
RT717_11345 (dnaE)
Enzymes [BR:
iro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RT717_11345 (dnaE)
DNA replication proteins [BR:
iro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RT717_11345 (dnaE)
DNA repair and recombination proteins [BR:
iro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RT717_11345 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
DUF530
Motif
Other DBs
NCBI-ProteinID:
WOK09232
LinkDB
All DBs
Position
2747693..2750671
Genome browser
AA seq
992 aa
AA seq
DB search
MYLNTHSYYSFKYGTMSPNELLEEARTKGVFTLCLTDINSTAGCLEFVREASKYGIRPIL
GVDFRNHLQQLYIAIARNNEGFQEINEHLSKHLREGSPPIPSGAPQKWQNVTVIYPWEIY
RKSLHNLLPHEWVGIKPHEITYLHLQKESLPKNKLVALVTSTFRHKRDYNTHRLLRAIAE
NALLTKLEPWQLAGDVDHFYSPAELATIYKETPQLLLNAERIAGESGIFFDFSDDRPHQN
LKTYTGSETNDFQLISKLCQDGVSYRYGKPTRQIQERINKELETIRAKGFVAYFLINWDI
LRYARSKDYFYVGRGSGANSIVAYLLHITDVDPIELDLYFERFINLYRTNPPDFDIDFSW
RDREDITQYIFNRFPNAALLATYSTFQYKSVARELGKVFGLPSIEIEEMNTSTKSGKVPD
QLVQKIMSYSQLIHDFPSHLSIHAGGILIGEKPMTYFTATHLPPKGFPTTMFDMVLAEDV
GLYKFDILSQRGLGKIKEAIDIISNNNPADPKIDIHDIKRFKKDERVKELLREGKAIGCF
YVESPAMRMLLKKLKVDDYLGLVAASSIIRPGVARSGMMREYILRFRFPERRKDAHRVMM
DIMPETYGIMVYQEDVIKVAHMFAGLSLAEADVLRRGMSGKFRSREEFQEVRERFFNNCC
EKGYDKKLTEEVWHQIESFAGYAFSKGHSASYAVESYQSLFLKAYYPLEYMVATLNNGGG
FYKPELYAHEAKMHGAIIEAPCVNKSENQTTIDGKTITIGLGSVKDLEATTIERVLGSRH
KKGLFLSLEDLVSRTGISLDQLTLLLRVGALRYTGKTKQRLLWESHYMFGKMGGAKSKMQ
EQQLFGLPSIKDFELPALTVDPLDNAFDELDLLGYPLCDPFLLLRDIPFEPVMASQFPAY
LGKTVTMLGYLIATKNTSTLKGDAMHFGTFIDQEGNFIDTTHFPQVARKHPFRGKGFYRL
TGKVVDEFGFYSLEVSEMEKEALLSSIKMQNA
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
ttgtacctcaacacccactcttattacagcttcaaatacggcactatgagccccaacgag
ctccttgaggaagccagaacgaagggtgtgttcacactgtgcctgaccgacattaattca
accgccggttgtcttgagtttgtaagagaggcttccaaatatggcatcaggcccattctg
ggggttgatttccggaatcaccttcagcagctctacatcgctatagccaggaacaatgag
ggctttcaggaaataaacgaacacctttcaaagcacctcagagaaggctcaccgcccatt
ccgtcgggtgcgcctcaaaagtggcaaaatgtcaccgtcatctatccgtgggagatttat
agaaaaagccttcacaacttgcttccccacgaatgggttggcatcaaaccgcatgaaatt
acctatctgcacttgcagaaagagtctctcccaaagaataagcttgttgcattggtaact
tccacattcaggcacaaaagagactacaacacacaccggctgttaagggctattgctgaa
aatgctctgctgaccaagctcgaaccctggcagctggctggcgatgtcgaccacttttac
tcgcccgcagagctggcaaccatctacaaagaaaccccacaattactgctcaatgctgag
cgaatagccggtgaatccgggatattttttgatttcagcgacgaccggccccaccaaaac
ctaaaaacctatactggttcggagacaaacgacttccagctcatttccaaactttgtcag
gatggcgtctcttatcgctacggaaaacccacccgacaaattcaggagcggatcaacaaa
gagctggaaactatccgtgcaaaaggatttgtagcctactttcttatcaactgggacatt
ctccggtacgcccgcagcaaagactacttctacgtcgggcggggcagcggtgccaacagc
attgtggcctacctgctgcacataaccgatgtggatccgattgagcttgatctctatttc
gagcgcttcattaacctttacagaacaaatcctcccgatttcgatatcgacttttcgtgg
agagacagagaggatattactcaatatattttcaaccgcttcccaaacgctgcgttgctg
gctacctacagcacattccagtacaaatcggtggcgagggagttaggaaaagtttttgga
cttccttctatcgaaatcgaagagatgaataccagcacaaaaagcgggaaggtgcccgat
caattggtgcagaagatcatgagctatagtcagcttatccacgactttcccagccacctg
agtatccacgcaggaggcattctgatcggtgaaaaaccgatgacttatttcaccgccact
cacctgccacctaaaggatttcccaccaccatgttcgacatggtgcttgccgaagacgtt
ggtctgtacaagttcgacattctgagccagcgtggtcttgggaaaataaaagaagcgatt
gacatcatcagcaacaacaatccggctgatccaaaaatcgacatccacgatatcaaaaga
ttcaaaaaggatgaaagggtgaaggagcttctcagagagggtaaagcgatcggctgtttt
tatgtcgagtcgcctgccatgcgtatgctgctcaaaaaactgaaggtagacgactacctc
ggcctggtggccgccagttccatcataaggcctggcgtggcaaggtcgggcatgatgaga
gagtatattctccgcttccgttttcctgagcgaagaaaagatgcccaccgggtgatgatg
gatatcatgccagaaacctatggcattatggtctatcaggaagacgtgataaaagtggca
catatgttcgcagggctgtccctggccgaagcagacgttctgcgcagaggaatgtcaggc
aagttcaggtccagagaggagtttcaggaagtgagagaacgattcttcaacaattgttgt
gaaaaaggctacgataagaaactgactgaggaagtgtggcatcagatcgaaagctttgca
ggctatgcattctccaaagggcattcagcctcctatgccgtggagagctatcaaagccta
tttctgaaggcttactaccctcttgagtatatggtggccacgctcaataatggtggtgga
ttctacaagcctgagctctatgcccacgaagccaaaatgcatggagctattattgaggcc
ccttgtgtcaataaaagcgagaaccaaaccacaattgatggaaagaccatcacgattggg
cttgggtcagtgaaagacctggaagcgaccaccatcgaaagggtgctgggaagtcggcac
aaaaaaggactcttcctgagcctggaagatcttgtcagcagaacaggcatttcactcgac
caattgacacttttgctaagagtaggtgcgctccgttatacaggaaaaaccaaacagcgg
ctgctatgggagtcgcattatatgtttggcaaaatgggtggtgccaaaagtaagatgcaa
gaacagcagttgttcggacttccctccatcaaggactttgagctgcctgcattaacagtt
gatcccttggacaatgcctttgatgagctggatttacttggttatccactttgtgatccg
ttcttgttattgcgagacattccgtttgagcccgtaatggcatcgcagtttccagcctat
cttggaaaaactgtcacaatgctgggttacctcattgccacaaaaaacaccagcacgctc
aagggcgatgccatgcactttggcacattcattgaccaggagggcaatttcattgatact
acgcacttcccacaagttgccaggaaacatccttttcgtggcaaagggttctacaggcta
acaggaaaagtggtggacgaatttggcttctatagtctggaagtgagtgaaatggaaaag
gaagctttgctttccagcatcaaaatgcaaaacgcataa
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