Imperialibacter roseus: RT717_11490
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Entry
RT717_11490 CDS
T09469
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
iro
Imperialibacter roseus
Pathway
iro03030
DNA replication
iro03430
Mismatch repair
iro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RT717_11490 (holA)
03430 Mismatch repair
RT717_11490 (holA)
03440 Homologous recombination
RT717_11490 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iro03032
]
RT717_11490 (holA)
03400 DNA repair and recombination proteins [BR:
iro03400
]
RT717_11490 (holA)
Enzymes [BR:
iro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RT717_11490 (holA)
DNA replication proteins [BR:
iro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RT717_11490 (holA)
DNA repair and recombination proteins [BR:
iro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RT717_11490 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DUF6492
Motif
Other DBs
NCBI-ProteinID:
WOK09261
LinkDB
All DBs
Position
complement(2783503..2784525)
Genome browser
AA seq
340 aa
AA seq
DB search
MPKGYHEILKDVKSNTYAPIYWLQGEEPFFIDSIADYIEQHALDEGLKGFNQTVLYGKEN
KIIDILNHARQFPMMAERRVVLVKEAQDIADLNREEGEKALTAYLEKPNISTVLVFCYKY
KTIDARKKLAKELEKACVVLAEKRIYDNKVPDWIKVFAADLQLKLSEKAVYMLSEHIGNN
LERIHNELKKVKVNLPGDTVVDEHHIQRFVGISKDFNEFELQKAIGMKDHKKAFQIVQYF
GANTKSHPVIPLLVILFTYFTKLLLLHKNNQASDDELARKIGVSPFFVKEYKVAARNYSA
MMVIRNIHLLKNADLQVKGVTSNSISEEDLMKELVYKLMH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaggctatcacgaaattctcaaagacgtaaaatctaatacctatgctcccatc
tattggctccagggagaagaacccttctttattgattctatagccgactatattgaacag
catgcgctcgatgaggggctcaagggttttaaccaaacagttctctacggcaaggaaaat
aagatcatagatattttgaaccacgccaggcagtttccgatgatggcggagcgacgggtg
gtgcttgtgaaagaagcccaggatattgccgatttgaatagagaggaaggcgaaaaagcc
cttactgcttatctggaaaagcccaacataagcaccgtgctggtgttctgttacaaatac
aaaacaattgatgcccggaaaaagctggccaaggaattggagaaagcctgcgtggtgctg
gccgagaaaaggatttacgacaacaaggtgcccgactggatcaaggtgtttgctgccgac
cttcagctaaaactgagcgaaaaggccgtgtatatgctttctgagcacattggtaacaac
ctggaaaggatacataacgagctgaagaaagtgaaggtaaacctgcctggcgatacggtg
gtggacgagcatcatatccagcggtttgtcgggatcagcaaagattttaacgaatttgag
ctccagaaggccattggcatgaaagaccataaaaaagcctttcaaatagtacagtatttt
ggggccaacacaaagagtcaccctgttatcccccttttggtgattctgtttacttatttc
accaagctgctgctactgcacaaaaataaccaggcgtcggacgacgaacttgcacgaaaa
ataggagtttctccgttctttgtgaaagaatacaaggtggcggccaggaattacagcgct
atgatggttattcgcaatatccatttgctgaaaaatgctgaccttcaggtaaagggcgtt
accagcaattctataagtgaagaggatttaatgaaagaattggtatacaagttgatgcat
taa
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