Imperialibacter roseus: RT717_12715
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Entry
RT717_12715 CDS
T09469
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
iro
Imperialibacter roseus
Pathway
iro02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RT717_12715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iro03021
]
RT717_12715
Transcription machinery [BR:
iro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RT717_12715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
UPF0122
Scm3
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WOK09502
UniProt:
A0ABZ0J0N1
LinkDB
All DBs
Position
complement(3075560..3076423)
Genome browser
AA seq
287 aa
AA seq
DB search
MRQLKISKQITNRESQSLDKYLQEIGKVDLLTPDEEVTLAKRIREGDQMALEKLTKANLR
FVVSVAKQYQNQGLSLGDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNRVGSLNKISKTFSELEQKYEREPSPDELAEVLEVSTSEVVDTMKISGRHV
SMDAPFVQGEENSLLDVLENDMEETPDSGLINDSLRKEVQRALSTLTTREADVISLYFGL
NGEHAMTLEEIGEKFNLTRERVRQIKEKAIRRLRHTSRSKALKPYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacagttaaagataagtaagcagattaccaatcgtgagagtcagtcgcttgacaag
tatctccaggaaataggtaaagtagacctgcttacccccgatgaagaagtaacactagct
aaacgaataagagaaggagaccaaatggctttggagaaactgaccaaagccaaccttcga
tttgtggtgtcagtagccaaacaataccaaaaccaggggctttcgctgggtgatttgatc
aatgaaggaaacctgggccttattaaggcagctcagcgattcgacgaaaccagaggtttt
aagtttatctcttatgcagtttggtggattcgccagtcgattcttcaggcattggccgag
caatccagaattgtgcgccttcccttgaacagggtggggtcgttaaataagatttcaaaa
accttttctgagcttgagcaaaaatatgaacgtgagccatctccggatgaacttgccgaa
gtattggaggtatctaccagcgaggttgtggacaccatgaaaatatctggtcgtcatgtg
tcgatggatgcaccgtttgttcagggcgaagagaacagcttgctggatgtactggaaaac
gacatggaggagactccggattcgggccttatcaacgactcccttcgcaaagaagtacag
agggcactttctacgcttacaaccagagaagccgacgttatttcactttactttggactt
aacggagagcatgcaatgaccctcgaggagataggtgagaagtttaatctgaccagggaa
agggttcgccagatcaaggagaaagccatcagaagactgaggcatacatcccgcagtaag
gcccttaagccgtacttggggtag
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