Imperialibacter roseus: RT717_13655
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Entry
RT717_13655 CDS
T09469
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
iro
Imperialibacter roseus
Pathway
iro00061
Fatty acid biosynthesis
iro00071
Fatty acid degradation
iro01100
Metabolic pathways
iro01212
Fatty acid metabolism
iro02024
Quorum sensing
iro04146
Peroxisome
Module
iro_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RT717_13655
00071 Fatty acid degradation
RT717_13655
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RT717_13655
09145 Cellular community - prokaryotes
02024 Quorum sensing
RT717_13655
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
iro01004
]
RT717_13655
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
iro04147
]
RT717_13655
Enzymes [BR:
iro01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RT717_13655
Lipid biosynthesis proteins [BR:
iro01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RT717_13655
Exosome [BR:
iro04147
]
Exosomal proteins
Exosomal proteins of breast milk
RT717_13655
Exosomal proteins of breast cancer cells
RT717_13655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WOK09684
UniProt:
A0ABZ0IZ69
LinkDB
All DBs
Position
complement(3320265..3321953)
Genome browser
AA seq
562 aa
AA seq
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MKDYPWLKHYPAGVAKEINPDEYTSLIELLGEAMKKYADQTAFLNMDKGFTYREVDEKST
QFAAYLQKKLGLKKGDRIAIQMPNCLQYPIVMFGAIKAGLVVVNTNPLYTHKEMEHQFKD
SGAKAIVIVANFAFNLEKIIANTDIKHVIVTELGDFLKGIKGPIVNFVVKRIKKMVPSFS
IPGAISLKQAMKEGASLQFDKPEIRGEDVAFLQYTGGTTGVSKGATLSHRNMVAHTLQTT
QWFQPIFVEGEEVVVITALPLYHIFALAVNGLLMFHVGAKNVLITNPRDMKAFCADMKKN
PFSIITGVNTLFNGLLNQESFKTLDFSKLKGAIGGGMAVQKAVAERWREVTGCPLVEGYG
LSETSPVLACNPLDGTHRNGFIGLPVPSTQIVLLDDDGKEVPVGQPGEICAKGPQVMSGY
WERPDETAKVFVDGWFKTGDIGIIDKDGFVKIVDRKKEMILVSGFNVYPNEVEDTVASHP
KVLEVGAIGVPDPKSNEAVKVFVVKKDQSLTEEELISFCREGLTRYKVPKHVEFVKELPK
SNVGKILRRILKENDAKVNSYN
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaaagattatccctggttaaaacactaccccgctggtgttgccaaagaaattaacccc
gatgagtatacatcattgattgaactgctcggagaggccatgaagaaatatgcagatcag
actgcgtttctcaacatggacaaaggctttacctacagggaggtggatgagaagtcgaca
cagtttgctgcctatctgcagaaaaaattgggtctgaaaaaaggagaccgcatagccatc
caaatgccaaactgcctgcagtaccccatcgtcatgtttggagccatcaaggctgggctt
gtggtggttaacaccaatccgttgtatacacacaaggaaatggaacaccaattcaaggac
tcgggcgccaaggccattgtgattgttgccaattttgcgtttaacctcgaaaaaataata
gccaacaccgatataaagcatgtcattgttactgagttgggtgacttcttaaagggtata
aaagggcccatcgtaaacttcgtagtgaagcgtataaagaagatggtgccgtcctttagt
atccccggagccatcagtttaaaacaagctatgaaggaaggtgccagtcttcaatttgat
aagccggagatcaggggagaagacgtggcgtttctgcaatacacaggaggtaccacaggt
gtgtccaagggagccacattgtcgcatcgtaacatggttgcgcataccttgcagacgacg
cagtggtttcagccgattttcgtggaaggcgaggaggtggtggtcatcaccgcactaccg
ctttatcatattttcgccttggcggtgaatggcctgctgatgtttcatgtgggagcaaaa
aatgtgctcataacaaacccgagagacatgaaagctttttgtgccgacatgaaaaagaac
ccgtttagcattattactggcgttaatacgctgttcaacggcttgcttaatcaggagagt
ttcaaaacgctggactttagtaaacttaagggagcgattggcggtggcatggccgtgcaa
aaggcagtggctgaaagatggagggaagtgaccgggtgccctctggtagaaggatatgga
ttgagcgaaacctcgccggtacttgcttgcaacccacttgatggcactcatagaaatggg
tttataggcttgccagttccaagtacgcaaatagtgctgctggacgacgatggaaaagag
gtgcctgttggtcagcctggagaaatatgtgcaaagggcccacaagtaatgagtggctat
tgggagagacccgacgaaacggcgaaagtgtttgttgatggttggttcaaaaccggcgac
atagggattatcgacaaggatggttttgtgaaaattgttgatcggaagaaagaaatgatt
ctcgtttctggcttcaatgtctatccgaatgaagttgaagacacagtagccagccacccg
aaggttcttgaggtaggtgctattggggtgcccgatccaaaatcgaacgaggctgtaaaa
gtctttgtagtaaaaaaggatcaaagtcttactgaagaagagctcataagcttttgcagg
gagggcctgacacgctacaaagtaccgaagcatgtagagtttgtgaaagaacttcccaaa
tctaatgttggtaagattctgcggcgaattttgaaggaaaatgatgcgaaggttaattct
tataattga
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