Imperialibacter roseus: RT717_14435
Help
Entry
RT717_14435 CDS
T09469
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
iro
Imperialibacter roseus
Pathway
iro03030
DNA replication
iro03430
Mismatch repair
iro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RT717_14435 (dnaE)
03430 Mismatch repair
RT717_14435 (dnaE)
03440 Homologous recombination
RT717_14435 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iro03032
]
RT717_14435 (dnaE)
03400 DNA repair and recombination proteins [BR:
iro03400
]
RT717_14435 (dnaE)
Enzymes [BR:
iro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RT717_14435 (dnaE)
DNA replication proteins [BR:
iro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RT717_14435 (dnaE)
DNA repair and recombination proteins [BR:
iro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RT717_14435 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WOK04275
LinkDB
All DBs
Position
3480539..3484720
Genome browser
AA seq
1393 aa
AA seq
DB search
MYLIFDTETTGLPQNYNAPLTDLDNWPRVVQIAWQLHDASGKLVSNNNLIVKPEGFEIPF
NAEKIHGISTKRALEEGLPLEDVLQQFNEDLARCEVVVGHNIEFDINIMGCEYLRKEIES
PLTSLKSIDTKNESTEYCAIPGGRGGKFKWPTLTELHKKLFGVGFDEAHDAAYDVAATTK
CFFGLITEKVIKPLDGADPASIVYEEPKLEAANFAQKEDKDKTPGKAVAVDIKGPFCHLH
VHSQFSILPATADIKKLVSKAKEYDMPAVALTDLGNMFGAFKFVREAHAQGIKPIVGCEF
YVSEDRKTRKFTKDNPDRMTQQVLLAKNKDGYHNLIKLSSLGYMEGLYGLYPRIDKELIK
QYSKNVIALSGNLSSEIPNTILNQGESQGEELFKWWVEVFGDDFYVELIRHGLPEENHVN
DVLLGLAAKYNTKVIAANDVFYTEKADADAHDILLCVKDGQVQSTPKGAGRGNRFGFPND
QFYFKSEEEMKKLFADVPEAIENIGGLLEKIESYKLDRNVLLPAFPIPEGFETEDDYLRH
LTMEGAKKRYNEITPEIQERLDFELETIKKTGYPGYFLIVQDFTSEARKMGVSVGPGRGS
AAGSAVAYCIGITNVDPIKYDLLFERFLNPDRVSLPDIDIDFDDEGRGKIIEWVVNKYGK
NQVAQIITYGTMAAKSSIRDSARVMELPLSDADILAKLVPERPGTSLTQAFREVPELMAF
KNGKDLKAQVLQKAAVIEGTVRNTGIHACGIIITPDDLTNHVPVSTAKDSDLLVTQFDNS
VVESAGMLKMDFLGLKTLSIIKTAIENIRLRHGITIDPDEIPLDDAKTFELYQKGQTNGT
FQFESPGMQKHLRNLKPDRLEDLIAMNALYRPGPLEYIPNFIARKLGKEVIAYDLPEMED
NLKETYGITVYQEQVMLLSQKLADFTKGEADVLRKAMGKKQREVLDKMKGKFVEGATKKG
HPKDKLDKIWKDWEAFAQYAFNKSHSTCYSVVAYHTAYLKANYPAEYMSAVLTHNQSSIE
KVSFFMEECRNLGLPVLGPHVNESRVNFAVNKKGEIRFGLGAIKGAGEAAVQSIIEEREK
NGPFQDIWDFGVRVVKNGFNKKTFECLAMSGAFDCFEEYHRRQYLEAADGESTLVELITK
YSQRLQQEAASDQVSLFGGSGQVEVPKPRIPDIEPFGDIRKLNIEKEVVGLYISGHPLDQ
FSFEMKHFCNTTLTDLKNDESLANGGIIRLGGIVSGINHRTTKKGNPFGVLTLEDYSDSY
EFFMFSDTYVKFKQFYMVGWYLFIEGFMQPSKFRVGELEFKISEIQLLNDIRDKMAKGLI
LKLDVNNLTEQMIDELHQMAIDHAGSCPLKVVVQDPSENISLELFSRKLQVEPKGELIKQ
LDAVGDLEYEVMT
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgtacctcatatttgacaccgaaaccaccggtttaccccaaaactataatgcgccgtta
acggatttggacaactggcccagggtggtgcaaattgcctggcaactgcacgatgcctcc
ggaaagcttgtttcaaacaacaacctgattgtgaagccagaagggttcgaaattcccttc
aatgctgagaaaatacatggcatttctactaaaagagcactggaagagggcctccctttg
gaagatgttcttcagcagttcaacgaagacctggccaggtgcgaagtagtagtaggccac
aatattgagttcgatatcaatatcatgggctgtgagtatctccgcaaagagatcgaaagc
ccactgacatcgctcaagagcatcgatactaagaatgagtctaccgaatactgtgccatc
cctggcggaaggggcggcaagttcaaatggcccacgctcactgagttgcacaaaaaactt
ttcggcgttggattcgatgaggcgcacgatgctgcctacgacgtggcagccaccaccaaa
tgtttcttcggactgatcacagaaaaggtgatcaagccccttgatggcgctgaccctgcc
tctattgtttatgaagaacccaagctggaagcagcgaattttgcgcaaaaggaagacaag
gataagacacccggaaaagctgtcgctgttgatatcaaaggccccttctgccaccttcac
gtgcactctcagttttccattctccccgccaccgccgatatcaaaaaactggtgagcaaa
gccaaagaatatgacatgccggcagtggccctcaccgaccttggcaacatgtttggcgcc
tttaagtttgtaagagaagcccatgcacaggggatcaaacccattgttgggtgtgagttt
tatgtctctgaagaccgcaaaaccagaaagttcaccaaagacaatcccgataggatgacc
cagcaggtgttgctggccaaaaacaaagatggctatcacaatctgatcaagctttcgtca
ttgggttacatggaaggactttatgggctttatccccgaatcgacaaagagctgatcaag
caatacagcaagaacgtgattgcactgagtggcaacctcagcagtgagattcccaacacc
atcctgaaccagggcgagagccagggcgaagaactttttaagtggtgggtagaggttttt
ggcgacgacttttatgtggaactcatccgccatggcctgcctgaagaaaaccacgtgaat
gatgtgcttctggggctggcagcaaaatacaacaccaaggtaattgcggctaacgacgtc
ttctacaccgaaaaagctgacgccgatgcccatgatatcctgctgtgcgtaaaagacggc
caggttcagtcaacgcccaagggagctggcagaggcaatcggtttggttttcctaacgac
cagttctatttcaagtccgaagaggaaatgaaaaagctgttcgccgatgtgccggaagcc
atcgaaaacatcggcgggttactggaaaaaattgagagctacaaactggacagaaatgtg
ctcctgcccgccttccctatccctgaaggctttgaaacagaggacgactacctgcggcac
ctcaccatggaaggtgcaaaaaagcgctacaacgaaatcacccctgaaatccaggaaagg
ctggacttcgaactggaaacgatcaaaaaaacgggctaccctggctacttcctcatcgtg
caggatttcacctctgaagcccgtaagatgggtgtttcggttggccctgggcgtggatcg
gcagcgggttcggcagtagcctactgcatcggcattaccaacgtagatcctatcaagtac
gatctgctgtttgagagattcctgaatccggacagggtatcactccccgatattgatatt
gactttgacgatgaaggccggggcaaaatcatcgaatgggtagtgaacaaatacggcaaa
aaccaggtggcgcaaatcattacttacggcaccatggccgccaagtcgtcgatcagagac
agcgccagggtgatggagctgccgctgtccgatgccgatattctcgccaagctggtgcct
gaaaggccgggaacgtcgcttactcaagcattcagggaagtgcctgagctcatggccttt
aaaaatggcaaagacctgaaggcccaggtgctgcaaaaagcggctgttatcgaagggaca
gtgcggaacactggtatccatgcctgcggcatcatcatcacgcccgacgacctcaccaac
cacgtgccggtgtccaccgctaaagattctgacctgctggtgacccagttcgacaacagc
gtggtggaaagtgcgggcatgctgaaaatggactttttgggcctgaaaaccctcagcatt
atcaaaacggccatcgagaatattcggctacgacatggtataactatcgaccccgacgaa
attccgctggatgatgccaagacattcgagttgtatcaaaaaggccaaactaatggtact
tttcagtttgaatcgccaggcatgcagaagcacctgcgcaacctgaagcccgaccggctc
gaggaccttattgccatgaacgccctgtaccgtccggggccgctcgaatacatccccaac
tttattgcccgaaagctgggcaaagaagtgattgcctatgacctccccgaaatggaggac
aacctgaaggaaacctacggcatcaccgtttaccaggaacaggtgatgctcctgtcgcag
aagctggccgacttcaccaaaggcgaggccgacgtgctgcgaaaggccatgggtaagaag
cagcgggaagtgctggacaaaatgaaaggcaagtttgtggaaggcgccaccaaaaaaggg
catcctaaagacaagctcgacaaaatctggaaagactgggaagcttttgcccaatatgcc
ttcaacaaatcacactctacctgctactcagtggtggcctatcacacggcctacctgaag
gcgaattacccggcagagtatatgtcggcggtgctcactcacaaccagagcagcatcgaa
aaggtgtcgttcttcatggaagagtgccgcaacctggggcttcctgtgttgggccctcac
gtgaatgaatcgagggtgaactttgcggttaacaaaaagggggaaattcgcttcggtctc
ggtgccattaaaggggctggggaggccgcagttcagtctatcatagaagaaagggagaaa
aacggccccttccaggacatctgggacttcggtgtgcgggtggtgaaaaacggctttaac
aagaaaacctttgaatgcctggccatgtcgggagcctttgactgttttgaagaatatcac
cgccggcagtacctcgaagcggcagacggcgagtcgacactggtcgagctcattaccaag
tattcgcagcgacttcagcaggaggcagccagcgatcaggtgtcacttttcggcggttcc
ggacaagtagaggtgccaaaaccacgaatacccgatatcgaaccctttggcgacatcagg
aagctgaacatagaaaaagaagtggtgggactatatatatcggggcacccgctcgatcag
ttcagctttgaaatgaaacacttctgcaacaccacgttaactgacctcaagaatgacgag
agtctcgccaacggtggtattatcagacttggcggcattgtaagtggtattaaccaccgc
acaaccaaaaaaggcaatccattcggtgttctgaccttggaagactattccgactcctac
gagttcttcatgttttctgacacctatgtcaagttcaagcagttctacatggtgggctgg
tacctgtttattgagggttttatgcaaccatccaaatttcgtgtaggggaacttgagttt
aaaatcagcgaaattcagttactgaatgacatcagagacaaaatggctaagggacttatc
ctgaagctggatgttaataacctcaccgagcagatgattgacgaactgcaccaaatggca
atagatcatgccggttcctgtccgctcaaggtggtggtgcaagacccctcggaaaacatt
tcgctggaactattctcccgaaagctgcaagtagagcccaaaggcgagttgatcaaacag
ctggacgccgttggtgatctcgaatatgaggtgatgacttga
DBGET
integrated database retrieval system
