Imperialibacter roseus: RT717_16020
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Entry
RT717_16020 CDS
T09469
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
iro
Imperialibacter roseus
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
Mg_chelatase
AAA_2
HTH_50
AAA
bpMoxR
HTH_30
HTH_28
AAA_16
HTH_1
AAA_19
AAA_30
Phage_AlpA
HTH_29
DUF815
IstB_IS21
HTH_IclR
HTH_23
HTH_3
Motif
Other DBs
NCBI-ProteinID:
WOK04589
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All DBs
Position
3838940..3840328
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AA seq
462 aa
AA seq
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MKKSNQAGRILIVDDNPDVLSAAKIFLKRHFLEVVTEKNPESLPNILMNETFDVILLDMN
FTKDVSSGHEGFFWLDKILEIDPSAVVILITAYGDVEVAVKAIKEGATDFVLKPWENEKL
LATVSSCMRLRESRLETNKLKDRQKQINEDLDTKYQEIIGRSDAIMKVFDTIEMVAGTDA
NVLILGENGTGKELVARAIHRHSKRASDVFLSVDLGAVSETLFESELFGHTKGSFTDAKE
DRAGRFETASGGTLFLDEIGNLSTPLQAKLLSVLQSRQVTRVGSNKARPIDIRLICATNM
HLYDMVKKSEFRQDLLYRINTIEINIPPLRDRLDDIPLLAEHYLGQFTKKYNKPIRSLSP
SVLKRMQKYSWPGNVRELEHAVERAVIMSRSMVLEADDFFLNQGGKEPDETAVNLDAYNI
EEMERILIRKALKRHNGNITQAAQELGLTRSSLYRRMEKYDF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagtaaccaggcagggagaattctgattgttgacgacaatcccgacgtgttg
agcgccgccaaaatatttctgaagcgacatttcctggaggtggtgacagagaaaaaccct
gagtcgcttcccaatattctgatgaatgaaacattcgatgtcattctcctggacatgaac
ttcaccaaagacgtgagctctgggcacgaaggctttttctggctcgacaagattctggaa
atagatccttcggcggttgtaatactgattacggcctacggcgatgtggaagtagctgta
aaagccatcaaggaaggcgccaccgactttgtgctcaagccgtgggaaaacgaaaaattg
ctggccacggtttcctcctgcatgaggctgcgtgagtcgaggctggagaccaacaaactc
aaagacaggcaaaaacagattaacgaggacctggatactaaataccaggagattattggc
agaagcgatgccattatgaaggtgttcgacacgatagaaatggtggcaggaacagacgcc
aatgtgttgatcctcggcgaaaacggcaccggcaaggagctggtggcacgagcgattcac
cgccattcgaagcgggcttccgacgtatttctcagtgtcgacttaggggctgtaagcgaa
acactattcgaaagtgagctgtttgggcatacaaaaggttcgtttaccgatgccaaagaa
gaccgtgcagggcgcttcgaaacagcctctggtggtactttgtttctggatgagattggc
aacctttcaacgccacttcaggccaagctgctgtccgtgctacagtcgaggcaggtgacg
agggttggctccaacaaagccaggcccatcgacattcgcctcatttgcgccaccaatatg
cacctttacgacatggtgaaaaagagcgaattccgtcaggacttactctaccgcatcaac
accatcgaaatcaacataccccccctgagagaccggctggacgacattccgttgctggca
gagcattacctcgggcagtttaccaaaaaatacaacaagcccatccggtcactaagtcct
tctgtgctgaagagaatgcaaaaatacagctggccgggaaacgtgagggagctggagcat
gcggtggagcgagccgtgatcatgagccgcagcatggtgctcgaagccgacgacttcttc
ttgaaccagggtggcaaagagcctgacgaaacagcggtaaacctggatgcctacaacata
gaggagatggagcgtatcctcatccgcaaagcactcaaacgccacaatggcaatattact
caggctgctcaggagctggggctgacccgctcttcgctttaccgacgaatggagaagtat
gatttttag
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