Imperialibacter roseus: RT717_17275
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Entry
RT717_17275 CDS
T09469
Name
(GenBank) helix-turn-helix domain-containing protein
Organism
iro
Imperialibacter roseus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
TPR_2
TPR_8
TPR_1
TPR_19
TPR_17
TPR_14
TPR_12
ARM_TT21_N
TPR_CcmH_CycH
TPR_7
TPR_6
TPR_16
TPR_15
TPR_11
Mga
HTH_24
Motif
Other DBs
NCBI-ProteinID:
WOK04837
LinkDB
All DBs
Position
complement(4113536..4115620)
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AA seq
694 aa
AA seq
DB search
MENQTSAGNPAENDFLNQLTEIIGDNLSDENFGVSELASEVNMSRSNLLRKINKLTKLSA
SQFIRQERLKKGMELLRQTSMNVSEVSYKVGFGSTSYFIKCFREYYGYPPGEVGKREHHE
PVSSAVVEKRKSLLVPALAVGTLLVIGALALWFFNQPQAPEAALAPLDKSIAVLPFKNES
NDSTNVYLINGLMESTLTNLQKMRDVRVISRTSSEKYRNTSKSIPEMAKELNVSYFVEGS
GQKIGDKILLNIQLIEAATDRHLWAKQYRREAKDIFELQEEVAKNIAEEIQVFITPEEEE
RIGKRPTESLAAYDFYLKGTELFYQSTGESLRASIPYYKNAIDIDDQFALAYADLTMVYF
YLDIYRSDKQYKEEISQASEKAFATDPTLAESLVAKALAYIYEGKNEQAVPYLEKALEYN
PNSGVVLHFLSEYYFSRQPDTGKYLEYALMKARVDIAADSATQSYNYLQISNALVQAGFV
DEALFYIDKSLAYEPGNTIAKMVKVFTQLAKTRSFVKAKDFLLKELENDPNNMMFLQELG
NTYFVLRDYENSYRYYKKFVNLKDSLHLDLYAHANLKIGAVYEKMGFNEEARLFVSRYKQ
YADNDPTIYMHVNQAAHFAYLKDWPKAIEEVTLFSKQDNFYIWVLLLDMDPMFEPIKDWP
EFQKAFGEVTAKFWRDHEEIKAHLGEKGLLPITL
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccaaacgtctgcgggcaatccggcagaaaacgattttttgaaccaactaaca
gagatcatcggcgacaacctgtcggatgaaaactttggagtgtcggagctggccagtgag
gtgaacatgagccgttcgaacctcctgcgcaaaatcaacaaactgaccaaactgtcagcc
agccagtttattcgccaggaaaggctaaaaaagggcatggagttgctccgtcaaacctcg
atgaatgtgtcggaggtgtcgtacaaagtgggttttggcagcacatcctactttatcaaa
tgctttcgggagtattatggttatccgccaggggaggtggggaaaagagaacatcacgaa
cctgtgagttcggctgttgttgagaaaagaaagtcgctcctggttccggcattggcggtg
ggaaccttgctagttatcggggcgctggccttgtggtttttcaatcagccgcaggcaccg
gaagctgcgttggctccgctcgataagtcaatagccgtgctgcccttcaaaaacgaaagc
aacgactccaccaacgtttaccttatcaatgggctgatggagtcgaccctgactaacctg
caaaagatgcgtgacgtcagggtgatcagccgcacatcttctgaaaagtaccgcaacacc
agcaagtcaattcctgaaatggcgaaggaattgaacgtaagctatttcgtagaagggagt
ggacagaaaattggtgataaaatattgttgaacatccagttgatagaagcagccaccgac
cgccacctttgggccaagcagtacagaagagaggcgaaagatatttttgaattgcaggaa
gaagtagccaaaaacattgccgaggagatacaggtgttcattacaccggaagaggaagaa
agaattggaaagcggccgacagagagcctcgcagcctatgatttttacctgaaaggcacc
gagctattttaccaaagcactggagaaagtcttagggcttctattccctattacaagaat
gctattgatatcgacgatcaatttgccctggcctatgccgatctcaccatggtgtatttt
tacctggatatctatcgatcagataagcagtacaaagaggaaataagccaggcttcggaa
aaggcattcgctactgatccgacgctggcagagagccttgtggcaaaagctctggcctac
atttatgagggaaaaaacgagcaggcagtgccctacctggaaaaagcactggagtacaac
cccaactcgggtgttgttcttcactttctttctgaatattatttttcccgccagccggat
acgggcaagtatctggagtatgctttaatgaaagcgagagtggacattgcggccgactcc
gccacccagagttacaactacctgcaaataagtaatgcgttggtgcaggcagggttcgtg
gatgaagcacttttttacatcgacaaatcccttgcgtatgagcctggcaacactatagcc
aagatggtaaaagtattcacccagctagccaaaaccagaagctttgttaaggcaaaagac
tttctactgaaagagctggaaaatgatcccaacaatatgatgttcttacaagagttgggt
aacacgtactttgtgctgagggactatgaaaattcttaccgttactacaaaaaattcgtc
aacctgaaggacagccttcatcttgatttgtatgcccacgccaaccttaagattggggct
gtgtatgaaaaaatgggttttaatgaggaggcccggctattcgtcagtcgctataaacag
tatgccgacaacgacccgacgatttacatgcatgtgaaccaggccgcacacttcgcctat
ttgaaagattggccaaaagccatcgaggaggtgaccttgttttcaaaacaggataacttc
tacatttgggtgctattgctggatatggatcccatgtttgaacctatcaaagattggcct
gaatttcaaaaggcatttggcgaggtaacggccaagttttggagggaccatgaggagatt
aaagcccacctgggggagaaggggctgctgccgataacactttag
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