Imperialibacter roseus: RT717_17660
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Entry
RT717_17660 CDS
T09469
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
iro
Imperialibacter roseus
Pathway
iro00470
D-Amino acid metabolism
iro00550
Peptidoglycan biosynthesis
iro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RT717_17660 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RT717_17660 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
iro01011
]
RT717_17660 (murD)
Enzymes [BR:
iro01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RT717_17660 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
iro01011
]
Precursor biosynthesis
Amino acid ligase
RT717_17660 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD_N
MurD-like_N
AlaDh_PNT_C
Pyr_redox_2
Sacchrp_dh_NADP
PH_PKH3_C
Rep_1
Motif
Other DBs
NCBI-ProteinID:
WOK04912
UniProt:
A0ABZ0IMV6
LinkDB
All DBs
Position
complement(4211204..4212583)
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AA seq
459 aa
AA seq
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MEAVKNIVILGAGESGVGAALLAQHKGFNVFVSDGGVLKERYRKDLNAAGIEFEEGKHTV
KQILEADLIIKSPGIADKVDIVKKAREKGVEIIDEIEFASRYTKAKTIAITGTNGKTTTT
LLTYHLLKEAGYNVGLAGNVGHSFARQVIKDNFDIYVLEVSSFQIDGMNTFKPDVAILLN
ITPDHLDRYDYSFQKYVNSKFRIIEKMTHEECFIYFADKGPIEEELARRNVEASIFAISL
VENVKNGAFLDEDHLVFNIESKKKSHKIPVNQVSLIGKHNMVNSMAAVLTTLTMEAPMEK
VVKALKTFKNAPHRLEKVATIDDVLFINDSKATNVDSVYYALEGIEAPIVWIAGGLDKGN
DYDRIEALVKDKVKALICLGKDNTKLTDYFTGKVASIRQTQSVNDAARWGADLSAPGDVV
LLSPACASFDLFRNYEDRGEQFKDAVVQLKNHVGRGQSV
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagtgaaaaatatcgtcattttaggtgctggtgaaagcggcgtgggagcagcc
ttgctggcgcagcataaaggattcaatgtatttgtgtctgatggtggcgtgctgaaggag
cgctatcgcaaagacctgaacgctgccggcatcgagtttgaggaagggaagcacacagtc
aagcaaatcctggaagctgacctgattatcaagagccctggcattgccgacaaggtagat
atcgtgaagaaggccagggaaaagggcgttgaaattattgacgagatagaattcgcttcg
aggtatacgaaggcgaagacaatagccattaccggcaccaacggaaagaccaccaccacg
ctgcttacctaccatttgctgaaggaggcgggttataacgtggggctggctggcaatgtg
gggcacagctttgcccgtcaggtaatcaaagacaattttgacatctacgtattggaagtg
agcagcttccagatcgacggaatgaatacgttcaagccagacgtggccattttgctcaat
atcacgcctgaccacctcgacaggtacgactatagcttccagaaatatgtcaatagcaaa
ttcaggatcattgagaaaatgacccatgaagagtgcttcatctactttgctgacaagggg
cctattgaggaagagctcgccagaagaaatgtggaggcatcaattttcgctatctctttg
gttgagaatgtgaaaaatggagctttcctcgacgaagaccatttggtattcaatatcgag
tcgaagaaaaaatcgcacaaaattcctgttaatcaggtgtcgctcatcggtaagcataac
atggtgaattccatggcggcggttttgacaacgctaaccatggaagctcccatggaaaaa
gtggtaaaagcgctcaaaaccttcaagaatgcgcctcaccgcctggagaaagtagcgacc
atagacgatgtgctgttcatcaacgattcgaaagccaccaatgtagactctgtctactat
gccctggaaggcattgaggcgcccattgtgtggatagccggtggcctcgacaaaggcaat
gattacgataggatagaggctttggtaaaagacaaggtgaaagccctgatctgtttggga
aaagacaataccaaactgacggactacttcaccggcaaagtggcttctatcaggcagaca
caatcggtaaatgatgctgcccgctggggtgcagacttgtcggccccgggtgatgtggtg
ctgttgtcaccggcttgcgccagtttcgacctgttcagaaactatgaagaccgtggtgag
cagttcaaagatgcagttgtccaattaaagaatcatgtaggaagggggcaaagcgtatga
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