Imperialibacter roseus: RT717_20355
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Entry
RT717_20355 CDS
T09469
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
iro
Imperialibacter roseus
Pathway
iro00541
Biosynthesis of various nucleotide sugars
iro01100
Metabolic pathways
iro01250
Biosynthesis of nucleotide sugars
Module
iro_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RT717_20355 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
iro01005
]
RT717_20355 (rfaD)
Enzymes [BR:
iro01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
RT717_20355 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
iro01005
]
Core region
RT717_20355 (rfaD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NmrA
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
WOK05430
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All DBs
Position
4801275..4802240
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AA seq
321 aa
AA seq
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MIVVTGAAGFIGSCLISSLNKKGFRAIVAVDDFSNEEKNKNLQEKQIIERVDRDDFFGWI
ENNQKQIEFIFHLGARTDTTEFDRELLWKLNTNYSKKVFELCTLYQIPLVYASSAATYGL
GEIGYDDDESRLSELKPLNPYGESKNEFDIWVLQQEKKPFFWAGLKFFNVYGPNEYHKGR
MASVILHAYHQIEKTGKMKLFQSHNPAYKDGEQMRDFVYVMDVCSICLFLMHHRKDSGIY
NLGSGRARTFKDLVLAVFNALEKKPEIEFIPTPEDIRDKYQYFTEASMTKLRSIGYDQPF
TELESGVVDYVKGYLSKSTYY
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtagtaactggtgctgctggctttattggaagctgccttatttcaagcctgaac
aagaagggtttccgggccattgtggctgttgatgatttctccaacgaagagaagaacaaa
aacctccaagagaagcaaataatagaacgtgtggacagggatgacttcttcggctggatc
gagaataatcaaaagcagatagaattcatctttcatctgggagcacgcacagacactacc
gagtttgaccgggagcttctttggaagctgaatacaaactattcaaaaaaggtttttgag
ttgtgtacgctgtatcaaattccgctggtgtatgcgtcgtcggccgctacttatggcctg
ggggaaattggctacgacgacgatgaatcgaggctttccgagctcaaaccattgaacccg
tacggtgagtcgaagaatgaatttgatatctgggtattgcaacaggaaaagaaaccgttc
ttttgggccggcctcaagttcttcaatgtatacggccccaatgaataccacaaaggaaga
atggcctctgtgatccttcatgcctaccatcaaatagagaaaacaggcaaaatgaagctt
ttccagtcgcacaatccagcctacaaagacggtgaacaaatgcgtgactttgtgtatgtg
atggatgtgtgcagcatttgcctgtttctgatgcaccacaggaaggacagtggcatttac
aaccttgggtctggccgtgcgagaacatttaaagacctggtgctggcagtgttcaacgca
ctggaaaaaaagcctgagattgagttcatacccacgcctgaggacatcagggacaagtat
cagtactttactgaggccagcatgactaaactaagatctatcgggtatgatcagccattt
acagagttggaaagtggggttgtggattatgtaaaaggctatctatccaaaagcacatac
tactaa
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