Imperialibacter roseus: RT717_21400
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Entry
RT717_21400 CDS
T09469
Name
(GenBank) T9SS type A sorting domain-containing protein
Organism
iro
Imperialibacter roseus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
Cadherin
Por_Secre_tail
GspA_SrpA_N
Cadherin_4
PrkC-like_PASTA-like
Motif
Other DBs
NCBI-ProteinID:
WOK05635
LinkDB
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Position
complement(5065977..5071313)
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AA seq
1778 aa
AA seq
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MALSTNVYPQKIAAGDFHNLLIKEDGSLWAWGENSYGELGIGVTGDQSSPVRVGVESDWT
KASAGWSYSVGIKTDGTLWAWGRNQFGRLGDGTSEDRPTPTQIGTSTDWLDISAGREHVL
AIRSDGTLWAWGRNNQGQLGDGSQVDKAEPVQIGEDDDWKEARGGFDHSIAQKNDGTLWV
WGNNKSGSLGYQTATDCIVTQVSNPSRTYSIAFSDSGGDGWNGALIRVIIDGVGNDYTLE
EGFGATKVVYIPLGTANVSFEFVSGTADSEVAYVINSASGGAIMAEDGPSPTPGLIEVDV
CIGQNTFVPSPVRFNTNTDWSSFSAGYNFNVAVKDNGTLWSWGENSYGQLGSGSFESRYE
PRIVGSDTDWIDAVAGYYNAFAIKSDGSLWSWGLNGVGHLGIGSQEDRLLPVEIPFASGW
AEISVGNDHSIAISDDGMLWSWGYNGSGQLGIGNEVRPLSPIKIGNDYDWVNVIGNVSYT
LAQKSNGTLYGWGSNLRGRLGNGTEISENAPIQINAVTNQKKISSYRHVLVLKNDGTIWS
WGENFYGQVGDGTIIHRLTAVQVGEDTDWTDVFVGYNSSYALKSDGKLWVWGNNSDGQLG
MGTTESSSVPVKLNDDTDWLTLSAGFRHTLAVKADGTLWAWGYNYYGQLGDGSNNSSLIP
IQIGTDTDWSFVEAGDHFSLAQKTDGSLWSWGQNDEGQLGDGTTDNRLAPVRIGGQSDWA
VIDAERVSMAIKTDGSLWGWGGNEYGQVGDGTTTDKLLPTRIGNDTDWTNVDGGGVHTVA
TKSDGSLWAWGVSAGGRLGDGNGWRVSPVRVTTMEIDLSTRVISSGQVGSDVCDILTVSS
DSDATPSFSLVAGQGSIDNALFTVSGSSLMVAATLNRQTQATYSVRIQAIDEFGNTFRKT
FILSWDNSAPTTIELDVDEIAENLPENTKVGLLSSVDGDEGDTFTYSLVAGEGSMDNGSF
FIVGDELRTAAQFDFETKSSFSVRIETRDALGAVFSAPFAVTVTDANDPPTSVSVSNAEF
TENLLIGSELATLSTSDQDETDSHTYTLVTGEDDTDNASFTISGDKLLSDAVFDFETKMS
YTVRIQTKDLAGAVFSESFSITITDANDAPTALSLSASEFSENLPVGRELATLSTSDQDE
TDSQTYTLVTGEGDADNVSFTIGGDKLLSDAVFDFETKTSYTVRIQTKDLAGAVFSESFS
ITITDVNDAPTALSLSASEFSENLPVGRELATLSTSDQDETDSQIYTLVTGEGDTDNASF
TISGDKLLSDAVFDFETKTSYTVRIQTKDLAGAVFSESFSITITDANDAPTALSLSASEF
SENLPVGSELATLSTSDQDETDSHTYTLVTSEGDTDNASFTISGNKLLANAVFDFENKAA
YTIRIQTEDSGGEVFSRAFALTIINANDFPSDILLSSSVITQQIVAGIEVGVLSTTDQDA
SNTHTYELVVGDGSTDNTLFTITDNKLLTNEAIVNNKKEAYSVRIQSKDVSEGVFSKAFS
ISTANLKAEQVITFELPANLYPDESPVALSASSTSELPVSFVLVSGLATLDGNQLTLTGS
GEVVVMATQAGNDDFLPAGSVSRTLIVKSFLSLAVTVNKSEDVVLDTGTATLLSSEGSII
KEATVGEGSLQMDGLKAGNYILQITPGEEESELVNTTYYPFAVSFEEAEPISIVENTALS
MTMVAKEEVVQGLETPLGSLQLYPNPASDQLVVSLSLDELKALESIRLYSMDGQFLRNLS
VEKGQASLYLDVKTLEPGVYFLRLTFQDGISTGKFLKE
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atggctctaagtactaatgtgtatcctcaaaaaattgcagcaggagacttccacaattta
ttgatcaaagaagacggctccctgtgggcctggggcgagaactcttatggggagttgggt
atcggggttactggtgatcagtcttcacccgtgagggttggtgtggaaagcgattggaca
aaagctagtgcagggtggtcgtattctgtgggaatcaagacagatggtacgctatgggcc
tgggggagaaatcaatttggccgtctgggtgatggaacttctgaggatcgacctactcca
acgcaaatcggtacgtcgacagattggcttgatatcagcgccggacgtgaacacgtgctc
gcaatcagatcggatggcactctttgggcgtggggcaggaataatcaaggccaattggga
gatggcagccaagttgataaggctgaacctgtgcagataggagaagacgatgattggaag
gaagcaagaggcggttttgatcactcgatagctcaaaagaatgatggcactctttgggta
tggggaaataacaaaagtggaagtctgggttatcagaccgccactgattgtattgtaaca
caggtgtcgaacccttcaagaacctactcaattgcatttagtgattcaggaggtgacggt
tggaatggagccttgattagagtaattattgatggagttggaaacgactacaccttagag
gagggatttggtgctactaaagttgtttatattcctcttggaacagcaaacgtttcattt
gagtttgtttcgggcacggcagattctgaagttgcctatgtaataaattcagcaagcggt
ggggcgataatggccgaggacgggccaagccccactccaggcctaatagaggtcgatgtt
tgcataggtcagaataccttcgtgcccagcccagttcgttttaataccaataccgattgg
agtagttttagtgcaggatataacttcaacgtggcggtaaaagataatggaacgctctgg
agctggggagaaaattcttatgggcaacttggcagcggttcctttgaaagcaggtacgag
cccaggatagttggaagtgatacagactggattgatgcagttgcagggtattataacgct
tttgcgataaagagtgacggaagtttgtggtcttggggactcaatggcgtgggtcactta
ggtataggttctcaggaagaccgtctactgcctgttgagattccctttgcgtctggttgg
gcagagatttctgttggcaatgatcattccatagctatttctgatgacggaatgttatgg
tcttgggggtacaatggaagtggccaattgggtattggcaatgaggtaaggcctttgtca
cctatcaagattggaaatgattacgactgggtaaacgtaattggtaatgtatcctatact
ttggcccaaaaaagcaatgggactttgtatgggtgggggagtaatttacgtggaagatta
ggtaatggaacagagatatctgaaaatgctccgatacaaattaatgctgttaccaaccaa
aagaagataagttcgtatcgccatgttttggttttaaagaatgatggaacgatttggagc
tggggtgagaacttttacgggcaagttggggatggaacaatcatacataggttgacggcg
gtgcaagttggcgaggatacagactggacggacgtctttgtcggatataatagttcatat
gccttaaaatcagatggcaaattatgggtatggggcaataattcggatggccaattgggc
atgggaacaacagaaagttcgtctgttccggtaaagttgaatgacgatacagattggctt
acgctttcggctggctttcgtcacacacttgctgttaaagcagatggtactctgtgggcc
tggggttataactactatgggcagcttggagatggctctaataatagttcactcataccg
attcaaatcggaacagatacagactggtcttttgtggaagcgggagatcatttcagcttg
gcacaaaaaactgatggttcgctttggtcatggggacaaaacgacgaaggccagctaggt
gacgggacaaccgataacagattagccccggttcggattggaggccaaagtgactgggct
gtgatagatgctgaaagggtttctatggctattaagactgatggtagcctttggggttgg
ggtggaaatgaatatggtcaggttggtgatgggactactactgacaagcttttgcccact
aggattggaaatgacacggactggactaatgttgacggtggcggagttcatactgtagcg
actaagtctgatggttcgctttgggcatggggagttagtgccggagggagattgggtgat
ggtaatggctggagagtttctccggttagggtaaccacaatggaaatagatttatctaca
cgtgttatatcatcaggccaggttggttcggacgtttgtgacattttaactgttagtagc
gattctgatgctactccaagcttttctctggtagctggacagggctcaatcgacaatgct
cttttcaccgtttccggcagcagtttaatggttgcggcaactctgaatcggcaaactcag
gccacttattccgtcaggattcaggctattgacgagtttggtaatacttttcggaagacc
tttatactttcctgggacaacagtgctccgacaaccatagagctcgatgtcgacgaaata
gcagaaaatcttcctgaaaacactaaagtaggcctgctgtcgtcggtagatggagacgaa
ggagatacttttacttactcactggtggcaggtgaagggagcatggataatggcagcttt
tttattgtaggggacgagttacgaactgcggcacagtttgattttgaaacgaaatcgagc
ttcagtgtgagaattgaaaccagggatgcactgggtgctgtgtttagtgctccatttgca
gtcacagttacggatgctaacgacccaccaacatctgtgtctgtaagcaatgcagaattt
actgagaacctccttattggcagtgaattggctacattgagcaccagcgatcaggatgaa
accgacagccatacctacacgctggtgactggtgaggacgacaccgacaacgcaagcttt
accatcagtggcgacaaattattatccgatgcagtattcgactttgagaccaaaatgtct
tataccgtcagaatccaaacgaaggatttggctggtgctgtgttcagtgaatctttttcg
attaccattaccgacgctaatgacgcaccgaccgccctatcacttagcgccagcgaattt
tcagagaacctccctgttggcagggaactggctacattgagcaccagcgatcaggatgaa
accgacagccaaacctacacgctggttacaggtgaaggtgacgccgacaacgtaagcttt
accatcggtggcgacaaattattatccgatgcagtattcgactttgagaccaaaacgtct
tataccgtcagaatccaaacgaaggatttggctggtgctgtgttcagtgaatctttttcg
attaccattaccgacgttaatgacgcaccgaccgccctatcacttagcgccagcgaattt
tcagagaacctccctgttggcagggaactggctacattgagcaccagcgatcaggatgaa
accgacagccaaatctacacgctggttacaggtgaaggtgacaccgacaacgcaagcttt
accatcagtggcgacaaattattatccgatgcagtattcgactttgagaccaaaacgtct
tataccgtcagaatccaaacgaaggatttggctggtgctgtgttcagtgaatctttttcg
attaccattaccgacgctaatgacgcaccgaccgccctatcacttagcgccagcgaattt
tcagagaacctccctgttggcagcgaactggctacattgagcaccagcgatcaggatgaa
accgatagccatacctacaccctggttacaagtgaaggtgacaccgacaacgcaagcttt
accatcagtggcaacaaactactggccaatgcagtatttgattttgaaaataaggcagcc
tacaccattcgaatccaaacagaggatagtggcggagaggtgttcagccgggcctttgca
ctgactattatcaatgccaatgacttcccatcagacatccttctttcatccagtgtaatt
acccaacagatagttgcgggtattgaggttggggtgctcagcactacagatcaggatgcc
agtaacacacacacgtatgaattggtcgttggcgacggtagtaccgacaataccctattt
actattactgataacaaacttctaacgaatgaagcaatagtcaacaacaaaaaggaagcc
tattcggtcagaattcaatcaaaggatgtctcagaaggggtatttagtaaagcgttttct
atttccacggccaatctaaaggccgagcaggtgattacctttgagcttccagcaaatcta
tatcctgatgaatcaccagttgcgctttctgcgagttcaacctcagagttgccggtcagc
tttgtgcttgtcagtggcctggcaacgctggatgggaatcaattgacactgacaggctcc
ggagaggtagttgtaatggctactcaggccggaaatgacgactttcttcccgccggaagc
gttagccggacattgatagtaaaatcctttcttagcctggctgtgacggtcaataaatct
gaagatgtggttcttgacactggaacggccaccctattgagcagtgagggcagcataatt
aaagaagctacagtaggtgaaggcagtttgcaaatggatggattgaaagcaggaaactac
atcttacaaattacaccgggagaagaggaatctgaattggtcaatacaacctattacccg
tttgcggtcagttttgaagaagccgaacccatttccattgttgagaatacagccctgagt
atgacgatggtggcaaaggaagaagtagtgcaaggactggaaacaccgttaggctcattg
caactttatcctaatccggcgagtgaccaattggtagtttcgctgagcctcgacgagcta
aaagcacttgagagcatacgactgtattcgatggatggccaatttttgaggaacctgtca
gtcgagaaagggcaagccagcctttacttagatgttaaaacattggaacccggcgtttat
ttcttacgactcacgtttcaggatggaattagtaccgggaagtttctgaaggaataa
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integrated database retrieval system
