Imperialibacter roseus: RT717_22375
Help
Entry
RT717_22375 CDS
T09469
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
iro
Imperialibacter roseus
Pathway
iro03030
DNA replication
iro03430
Mismatch repair
iro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RT717_22375
03430 Mismatch repair
RT717_22375
03440 Homologous recombination
RT717_22375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iro03032
]
RT717_22375
03400 DNA repair and recombination proteins [BR:
iro03400
]
RT717_22375
Enzymes [BR:
iro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RT717_22375
DNA replication proteins [BR:
iro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RT717_22375
DNA repair and recombination proteins [BR:
iro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RT717_22375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
RNase_H_2
DUF7508
GIY_YIG_2
Rv2179c-like
Peptidase_M13_N
DNA_pol_A_exo1
GIY_YIG_domain
Aminotran_4
Motif
Other DBs
NCBI-ProteinID:
WOK05824
LinkDB
All DBs
Position
complement(5305818..5307194)
Genome browser
AA seq
458 aa
AA seq
DB search
MYAIIDIETTGGNAQFSKITEIAIYVHDGTQVVDEFSTLINPECNIPPFITKLTGITNEM
VEDAPRFFEVAKKIVEVTEGKIFVAHNVNFDYGFVRHEFKRLGYEFKRDTLCTVKLSRKI
LPGKSSYSLGNLCKSLGIEIENRHRAGGDAFATVKLIEILLQADKGAVFNKFLEAGVGIG
KVNEFLTWEEISSLPENPGVYYFHNQAGEVIYIGKSKNIRSRVTQHLKKPAGLKGRELKN
KAASVTFEETGNELVALLLESEEIKKVQPMYNRMQLRNSYRYGLFADLQIDGYIHFNVGK
IDGKAEPFVVCSSEDESLKVLRRLVKRFQLCAHIAGLERQMTPERGCFDYSLQSCQGACV
GKEESDVYNERATLAMRSWQFKHPNCFIFDKGRHTEEKTIICIENGNYRGFGYADADLLG
NSPDLIRDCIQPKKPNREVNRLIYHYLETKRVEAVVEY
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtacgctatcatcgacattgagacaacggggggcaatgcgcagttttccaaaatcacg
gaaattgccatttatgtgcatgatggcacgcaggtggtcgatgaattttctacgctgatt
aaccccgaatgcaatatccctcccttcatcaccaaactcactggtattaccaatgaaatg
gtggaagatgcgccccgattctttgaggtggccaagaagattgtggaggtgaccgagggt
aaaatatttgtcgcacacaatgtcaacttcgattatggatttgtgaggcatgagttcaag
cgcctggggtacgagtttaagcgggacacactttgcactgttaagctcagcaggaagata
ttgccgggaaagtcaagctatagcctgggaaacctctgcaaaagcctgggtattgaaata
gaaaatcggcacagggctgggggtgacgccttcgccaccgtgaagctgatagagattcta
cttcaggcagacaagggagcagttttcaacaaatttttggaagccggtgtgggcattggc
aaggtcaatgagtttcttacctgggaggaaatttccagtttgccagaaaacccaggcgtc
tactacttccataaccaggccggtgaggtgatttacataggcaaaagcaagaatatcaga
agccgggttactcaacatctgaagaaaccggctggactgaaaggcagagagctgaaaaac
aaggcagcgtctgtcacttttgaggagacgggcaatgagctggtcgcacttttactggaa
agtgaggaaatcaaaaaagtgcagccgatgtacaacaggatgcagttgcggaattcctat
cgctatggcctctttgccgatcttcaaattgatggctatatccatttcaacgtgggaaag
attgatggcaaagcggagccctttgttgtttgctcctctgaggacgaatcgttgaaagtg
ctaagacgactggtcaagaggtttcagttgtgcgcccatattgctggcctggaaaggcag
atgacgccggagaggggttgctttgattatagcttgcagtcatgtcaaggggcttgcgtt
ggcaaggaggaaagtgatgtttataacgagagagccactttggccatgcgttcctggcaa
ttcaaacaccccaactgttttatatttgacaaaggccgtcatacggaagagaagacgatt
atttgtatagaaaatggcaactaccggggttttggctacgccgatgccgacttgctgggc
aatagccctgacctgatcagggactgcattcaaccaaagaaaccaaatagagaggtgaac
cgcctgatttaccactacctcgaaaccaaaagggtggaggcggtggttgaatattaa
DBGET
integrated database retrieval system
