Imperialibacter roseus: RT717_23880
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Entry
RT717_23880 CDS
T09469
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
iro
Imperialibacter roseus
Pathway
iro03030
DNA replication
iro03410
Base excision repair
iro03420
Nucleotide excision repair
iro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RT717_23880 (polA)
03410 Base excision repair
RT717_23880 (polA)
03420 Nucleotide excision repair
RT717_23880 (polA)
03440 Homologous recombination
RT717_23880 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iro03032
]
RT717_23880 (polA)
03400 DNA repair and recombination proteins [BR:
iro03400
]
RT717_23880 (polA)
Enzymes [BR:
iro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RT717_23880 (polA)
DNA replication proteins [BR:
iro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RT717_23880 (polA)
DNA repair and recombination proteins [BR:
iro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RT717_23880 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RT717_23880 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
HHH
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WOK06120
UniProt:
A0ABZ0IM72
LinkDB
All DBs
Position
5685595..5688384
Genome browser
AA seq
929 aa
AA seq
DB search
MSKPEKKLFLLDAMALIYRAHFAFSKNPRINSKGMSTGAILGFTNSLLEILTKEKPTHIA
ICFDTAAPTFRHVQYEPYKAHREAQPEDISIAIPWVKRMAEAYQIPVLELDGYEADDIVG
TFATKAGHMGFEVFMMTPDKDYAQLVQEHVYLYKPAFLGNSVEILGIPEVLAKFDIDHVD
QVRDLLGLQGDSVDNIPGIPGVGAKTASKLLKEFGTVENLIANTDKLKGKLQENVIQFAQ
QGVLSKELATIHCEVPIEFDEELLRFKGPDEEKLKGIFNELEFRTLAKRIFGEPKKQETG
SQMDLFGAPAPVISNESFEDEEPAEKKTAFTEVHDYHLIDTPELRKSLLKYLLLQKEVCF
DTETTNIDSFEAELVGISFAYVVGEAYYIPVPEKFEDAKKIAEEFREVFESETITKIGQN
IKYDMTVLKKYGVEVAGPLFDTMLAHYLVDPDTRHNMDVLAENYLNYSPISIETLIGKKG
VKQGTMRDADLAAIKEYAAEDADITLQLKEKLEPEVEKYGMKKLLDEVEGPLVKVLSYME
YEGVKIDTDALSQMSGELEKASKIVEKEIYEIAGETFNIASPKQLGEILFDKLKLIDSPK
KTKTGQYATGEDILSKLANEHPIANKILEFREYQKLKSTYVDALPLMISKIDGRVHTDYR
QAVAATGRLSSNNPNLQNIPIRTEKGREIRKAFIPREEGYKIFSADYSQIELRIIAAFAK
DESMIEAFKNGRDIHSTTAAKIFKKPLEEVDSDMRRIAKSANFGIIYGISAFGLAENLSI
SRTESKEIIDAYFTEFPAVKRYMDHIVNVAREQEYVTTILGRRRYLRDINSRNITIRGFA
ERNAINAPIQGSAADIIKIAMIRIHDWLIKEKMKTKMIMQVHDELVFDVHESELDVVKEK
VVHFMENAISLEVPLEVGTGVGNNWLEAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacccgagaaaaaactttttctgcttgacgcaatggccctcatctacagggcc
cattttgcctttagcaaaaacccaagaataaactcaaaaggcatgagcacaggagcaatt
cttggcttcactaattcgctgctcgaaatcttaactaaggaaaagcctactcatattgcc
atctgcttcgatactgctgccccaactttcaggcatgtgcagtacgagccatacaaagct
caccgggaagctcagccagaagacatatctatagccattccatgggtaaagcgaatggcg
gaagcctaccaaatccccgtgcttgagctggatggttatgaagccgatgacattgtaggc
acttttgccacaaaagctggccacatgggatttgaagtcttcatgatgacgcccgacaaa
gactacgcccagcttgtgcaggaacatgtttacttatacaagccagctttcctgggcaat
tcagtggaaattctgggtatccctgaagtgctggccaaattcgacattgaccatgtggac
caggtgcgtgatttgctcggcttacagggcgactccgttgacaatatacccggcatacca
ggtgtgggcgccaaaacagcctccaagcttttaaaagaatttggcaccgtagaaaacctc
atcgccaatactgataaacttaaaggcaagcttcaggaaaatgtaattcagtttgctcaa
caaggtgttttgagcaaagaattggctaccatccactgtgaagtgcctatcgagtttgat
gaggagctgttgcgttttaaagggccggatgaggaaaagctgaaggggatattcaatgag
ctggaattccgaacccttgccaaacgtattttcggcgagcctaaaaagcaggaaaccggg
tcgcaaatggatcttttcggtgccccggctccggtaatcagcaacgagagtttcgaagac
gaggagcctgctgaaaagaaaacggctttcacggaagtgcacgactaccacctgatcgac
acgccggagctaaggaaaagtctcctcaaatatctgcttctgcaaaaagaggtctgcttc
gacacggaaaccaccaatattgactcatttgaggccgagctagtgggcatctcctttgcc
tatgtagtcggcgaggcctactatatccctgtgccggaaaagtttgaggatgctaaaaaa
atagccgaagagttcagggaggtatttgaaagcgaaaccattaccaagattgggcagaac
atcaaatacgatatgacggtgctgaagaagtatggcgttgaagtggcagggccgctgttc
gacaccatgctggctcactacctggtcgatcccgacacccgtcacaacatggatgtgctc
gctgaaaactacctgaactacagccctatttctatcgagacccttatcggcaaaaaaggc
gtgaagcagggcactatgagggatgccgatttggcggccatcaaggaatatgccgctgaa
gatgccgacatcaccttgcaattaaaggaaaaacttgagcctgaggtagaaaaatacggc
atgaaaaaactgttggacgaagtagaaggtccgttagtaaaagtgctgtcatacatggaa
tacgaaggcgttaaaattgatacggatgcgctgagtcaaatgtcgggagagctggagaag
gctagtaaaatagtggaaaaagaaatctacgaaattgctggcgaaacattcaacattgct
tctcccaagcagctgggtgagatactttttgacaaactcaagctgatcgacagccctaaa
aagacaaagactggccaatatgcaaccggcgaagatatcctttcaaagctggcgaacgaa
caccccatcgccaacaagattctggaattccgggagtatcaaaagctgaagtcgacctat
gtggatgccttaccgctgatgattagcaaaatagatgggcgggtacacaccgactaccgt
caggcggtagctgccacagggcgactgagctcaaacaatccaaacctgcagaacatcccg
ataagaaccgaaaagggacgagaaatcagaaaggccttcataccacgggaagaaggctac
aaaattttctctgcagattattctcagatcgagctgcgcattattgccgctttcgccaaa
gacgaaagtatgattgaggcctttaaaaacggccgggatattcactcaaccacagccgcc
aaaatcttcaaaaagccattggaagaagtggactccgacatgaggcgcattgccaagtcg
gctaactttggtatcatctacggaatttcggcttttggtctggcggaaaacctaagtatt
tcccgtaccgagtcaaaagaaattattgatgcgtatttcactgagtttccggcagtaaaa
cgctacatggatcatattgtgaacgtggcacgtgaacaggaatacgtaacaaccatactg
gggagacgtcgctacctgagagatatcaactcccgaaacattaccatccgtgggttcgcc
gagcgaaacgccatcaatgcgcctatccaggggagtgccgccgatattataaaaatcgcc
atgatacgcatacatgactggcttatcaaggaaaaaatgaagactaaaatgatcatgcaa
gtgcatgatgaattggttttcgatgtgcatgaaagtgagctggatgtagtcaaagaaaaa
gtggtgcattttatggaaaatgccatttcccttgaagtacctttggaggtcggcaccggt
gtaggcaataactggctggaggcacattaa
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