Imperialibacter roseus: RT717_24540
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Entry
RT717_24540 CDS
T09469
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
iro
Imperialibacter roseus
Pathway
iro00550
Peptidoglycan biosynthesis
iro01100
Metabolic pathways
iro01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RT717_24540
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RT717_24540
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
iro01011
]
RT717_24540
Enzymes [BR:
iro01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RT717_24540
Peptidoglycan biosynthesis and degradation proteins [BR:
iro01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RT717_24540
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WOK06247
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All DBs
Position
complement(5843304..5845136)
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AA seq
610 aa
AA seq
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MNDSRKLYIQTGMVLVSVILLVRLFIIQIVDTSYKSAADSNIIQKVIEYPYRGEVYDRNG
KLLVYNSPVYDILGVPKEIENLDTAKFCRLFNISKADLIDRLNAARKYSPIKASKIVNLL
SPEEFAKTQDYLIDFPGFYVSARTVRGYTTKSAANALGYTGEISKRQLDADRTGYYSQGD
HIGISGLELSYERELRGKRGVKYKLVNVRGVDKGSFKNGLYDTLSIPGENITTTLDIELQ
QYAEKLLAGKVGSIVAIEPATGEILVFVSGPSYDPAVLSGRDFGANFTKLSQDSLVPLFN
RPLMAMYRPGSVFKIMQAMIGLQEGVITPNTVIACNQSVIGCHYHGPSENLLGAITMSCN
PYFHQVLKRVVNQDVSRDTYEDTRIGLEKWRGRVANFGFGSTLGIDLPNEKGGMVPNVAY
YDRAYNNQPWKYSNIYSIAIGEGENLVVPLQMANFTATVANRGYYYTPHLVKAISDTGKP
RPEYEVQHHTGINPEYFDIAVEAMHNVVEHGTGQYRAKLDDIVVCGKTGTVQNANSPDHS
AFIAFAPMDNPRIAVSVYVENAGQGARAAAAISGLIIEKYLKGEKAKLRMEPYVLKGDFL
DADEKAKFNL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacagcagaaaactatatattcaaactggaatggtgctggtgagcgttatactg
ctagtcaggcttttcattattcaaattgtagacaccagctacaaaagcgccgccgatagt
aatatcattcagaaggtaattgagtacccctacagaggtgaagtgtatgaccgcaatggc
aaactgctggtgtacaacagcccggtgtacgatattttgggtgtgcccaaggaaatcgaa
aacctggataccgcaaagttctgccgcctgttcaacatatctaaagctgatttgatagac
cgccttaatgcagcgagaaaatacagcccgatcaaagcgtcaaaaattgtgaaccttctg
tcgccggaagaatttgcaaaaacacaggattacctcatcgactttcccggattttacgtg
tcggccagaacagtgcggggctacactacaaaaagtgccgccaacgctctgggttatact
ggtgagataagcaagaggcaactggacgcagatcgcactggttactatagccagggtgac
cacatcggcattagtggccttgagctatcgtatgaaagagagttacgaggcaaaagaggg
gtgaaatacaaacttgttaacgttcgtggggttgacaagggcagcttcaagaacgggttg
tatgacacattaagtatccccggcgaaaacatcacaacaacgttagacattgagcttcag
caatatgcggaaaagcttctagccggaaaagtgggaagtattgtggccattgagccagcg
accggggaaatcctggtttttgtgtctggtccatcgtacgatccggcagtactaagtggc
agggattttggagctaattttacaaagctttcccaagacagcctggttcctctttttaac
cggcctctgatggccatgtaccgacctggttcggtttttaagatcatgcaggccatgatt
ggcttgcaggaaggagtaattactcccaatacggtaattgcctgtaaccagagcgtgatt
gggtgccattatcatggcccatccgagaatttgctgggcgccattaccatgtcctgtaat
ccttattttcatcaggtgttgaaaagagtggtgaatcaggatgtgtccagggatacttat
gaagatacccgaataggtcttgaaaaatggcggggcagggtagccaactttggttttggc
agcactctgggaatagatttgcctaatgaaaaaggtggcatggtacccaacgtggcctac
tacgacagggcttacaataatcaaccatggaagtactctaacatttattccattgcgata
ggcgagggcgagaacctggtcgttccactgcaaatggcaaattttacagccactgtggcc
aatcgtggttactactacaccccccacctagtaaaagcaataagcgacacaggcaagcca
aggccggaatacgaagtgcagcaccacaccggcatcaacccggagtattttgacattgct
gttgaagccatgcacaatgtggtagaacatggtacgggccaatacagagcaaaacttgat
gacattgtagtctgcggcaaaaccggcacagtgcaaaatgccaatagccccgatcactcg
gccttcattgcttttgctccaatggataacccacgaattgcggtatcggtttatgtagaa
aatgcaggccagggcgcaagagcggcggcagctatttccggccttattatcgaaaaatac
ctcaagggagaaaaggcaaaattgagaatggaaccctacgtactaaaaggagattttcta
gatgcggacgagaaggctaagtttaacctctaa
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