Imperialibacter roseus: RT717_24960
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Entry
RT717_24960 CDS
T09469
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
iro
Imperialibacter roseus
Pathway
iro00071
Fatty acid degradation
iro00280
Valine, leucine and isoleucine degradation
iro00310
Lysine degradation
iro00362
Benzoate degradation
iro00380
Tryptophan metabolism
iro00410
beta-Alanine metabolism
iro00640
Propanoate metabolism
iro00650
Butanoate metabolism
iro00907
Pinene, camphor and geraniol degradation
iro00930
Caprolactam degradation
iro01100
Metabolic pathways
iro01110
Biosynthesis of secondary metabolites
iro01120
Microbial metabolism in diverse environments
iro01200
Carbon metabolism
iro01212
Fatty acid metabolism
Module
iro_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RT717_24960
00650 Butanoate metabolism
RT717_24960
09103 Lipid metabolism
00071 Fatty acid degradation
RT717_24960
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RT717_24960
00310 Lysine degradation
RT717_24960
00380 Tryptophan metabolism
RT717_24960
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RT717_24960
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RT717_24960
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RT717_24960
00930 Caprolactam degradation
RT717_24960
Enzymes [BR:
iro01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RT717_24960
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RT717_24960
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RT717_24960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
F420_oxidored
NAD_binding_2
LEM
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
WOK06329
LinkDB
All DBs
Position
complement(5937124..5939259)
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AA seq
711 aa
AA seq
DB search
MASKAQNSFLTFEKHDEVGVIWMDLPGEEWNKISIDTEAQFREVMQQIEANTELKASVLI
SRKKGFMAGADIEKFLQMKPGESKATAQAGHAMLRDLEDSKKPCVAAIHGACMGGGLEIS
LACAGRVASNHSSTMMALPEVKLGLLPGLGGTYRLPKLVGVQNALSIILTGRNVYAFPAL
KMGLVDELVFQPKLLDAAIKLARKLAAGQFRRKIKVPLASKILESNPLTRGIIFSQATKM
MLRQTNGNYPAPYKILEAVKYGLSHTREQAAEKETELFDQLLQSPEAFQLINIFFAMNAL
RKNPMKELARPVKTLGVLGAGLMGEGIAEVTVQNGTDILLKDLQEPALAQAKKNIWLVLM
KKVKTRAITKADAETIINKVHTTTTYEGFHKADVIIEAVFEDINIKHKVLKETEATLRKD
CVFASNTSALPITKIAEASSRPETVIGMHYFSPVPKMPLLEIVVTGKTADWVTATALEVG
VKQGKTCIVVKDGPGFYTTRILAPFINEALLLMQEGADPLQMDKAMKKFGFPVGPITLID
EVGIDVGAHINKGDLEAFFNKRGAKSSNLLNKLAEAGFKGRKNRKGFLQYDEKTGKKLRG
KVNEEALRFIESRGSKTFTDSEIQDRLSLIMINEAVYCLQDGILKEPRDGDIGAVFGLGF
PPFLGGPFRYSDSEGAKTIVDKMAQLEKEIGSRFKPADLLVELAEKGKKFY
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaaaagcacaaaactcctttctgacttttgaaaaacacgacgaagtaggcgtg
atctggatggatttgcccggagaagagtggaacaagatatcgattgacactgaagcgcag
tttcgggaggtaatgcagcagattgaggcaaacacagagcttaaagcctctgtgctgata
agccggaagaagggttttatggctggtgctgatatagagaagtttttgcaaatgaagcct
ggtgaatcgaaagcaacagcgcaggcaggccatgctatgctgcgtgatctggaagactcc
aaaaaaccttgtgtggctgccattcatggtgcatgcatgggtgggggcctggaaatcagc
ctggcttgcgccggacgagtggcaagtaatcacagcagcactatgatggctttgccagaa
gtgaagctaggattgcttcccggcctgggaggcacttaccgactcccaaaactcgtaggt
gtgcagaatgcccttagtatcattctgacaggaagaaatgtctacgcctttccggcattg
aaaatgggactggttgatgagctggtctttcaaccgaagctgctggatgcggcgatcaaa
ctcgcaagaaagttggctgcaggccagttcaggaggaaaatcaaagtgcccctggcttcc
aaaattctggaaagcaatccgctgaccaggggcatcattttcagccaggcaacaaaaatg
atgcttcgccaaactaacggcaactaccctgctccttataaaatactcgaggcagttaaa
tacggattgagccatacccgggagcaggctgccgaaaaagagactgaactgtttgatcaa
ctgcttcagtcgcccgaggcatttcagctgatcaacattttctttgccatgaatgcgctg
cgcaaaaacccgatgaaagagcttgccaggccagttaaaactttaggagttttgggcgct
ggcctcatgggcgaaggcatagcggaagtcaccgttcaaaacggcaccgatattttgttg
aaagacttacaggagccagcattggcccaggccaaaaagaacatctggttggtgctgatg
aaaaaggtgaaaacaagagccatcaccaaagcggacgccgaaactatcatcaacaaagta
cacaccacgactacttacgagggtttccacaaggcggatgtgatcattgaggcggttttt
gaagacattaacattaaacacaaagtactgaaagagactgaagccactctgcgcaaggat
tgtgtcttcgcttcgaatacgtcggcattgcctattactaaaatcgcagaagcctcctcc
cggccggagacagtcattggcatgcattatttctcgccagtgcccaaaatgcccctactg
gagatagttgttacgggtaaaacagctgattgggtaactgccacagcgctggaagtaggt
gtgaagcagggcaaaacctgtatcgtagtgaaagacggcccgggcttctacactacccga
atcctggcgccattcatcaatgaagcgctgttgctcatgcaggaaggggccgatcctttg
cagatggacaaggcaatgaagaaattcggcttccccgtcgggccgatcaccttgattgat
gaagtaggtattgacgttggcgctcatatcaataaaggagatttggaagctttcttcaac
aagcggggagcgaagagctccaacctactgaacaaacttgccgaagcaggctttaagggc
cgcaagaaccgaaagggttttttacagtacgatgaaaagacaggtaagaaactgaggggc
aaagtgaatgaggaggcgttgcggttcatagaaagccggggaagcaaaacttttactgat
tccgaaatacaggacaggctgtcactaatcatgatcaacgaagcagtctactgcctgcaa
gatggtatattgaaagagccacgagatggagacatcggggcggtgttcgggttgggtttc
cctccttttctgggtggaccgtttcgctatagcgactccgagggagcgaaaaccattgtc
gataaaatggctcagctcgagaaagaaattggcagcaggtttaagccagccgatttgctg
gtggagctggctgagaaagggaagaagttttattga
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