Imperialibacter roseus: RT717_25120
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Entry
RT717_25120 CDS
T09469
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
iro
Imperialibacter roseus
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iro03019
]
RT717_25120
03009 Ribosome biogenesis [BR:
iro03009
]
RT717_25120
Messenger RNA biogenesis [BR:
iro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RT717_25120
Ribosome biogenesis [BR:
iro03009
]
Prokaryotic type
rRNA processing factors
RT717_25120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
DnaJ_CXXCXGXG
SHE3
DUF7351
Motif
Other DBs
NCBI-ProteinID:
WOK06361
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Position
complement(5982352..5983905)
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AA seq
517 aa
AA seq
DB search
MSNELIINSTPQGSRIALLRDKRLVEYHQESDDHQFNVGDIYLGTVKKIVQGLNAAFIDV
GYEKDAFLHYLDLGPQVQSLNKFTRLVLTNKNISHKLAGFKPEKDIDKLGKISQVLVKGQ
KILVQVVKEPISTKGPRLSCELSLAGRYLVLVPFSNTVNVSKKIDSSDERKRLVRLVSSI
KSENFGVIIRTVAQGKDVAELDKDLRNLVSIWEEGMKNLKTAQSKDKIIGEMSRTNSILR
DVLNESFDAIHIDDKKTFADVRAYVNKIAPDKEKILRQYTGKVKIFEHFHVEKQLKMSFG
RSVSVAGGGYLIIEHTEALHVIDVNSGNKSNAEEDQESTALRVNMDAASEIARQLRLRDM
GGIIVIDFIDLKKQDNRKKVYERMKQEMSTDRSKYTVLPLSKFGLMQITRQRVRPEMNIA
TREVCPTCNGTGKITASVIVADQIEKNIEHIFGKQNEKKLTISLHPYLFAYFTKGIYSKR
VQWFMKYYKWVHLIEDSSLGLTDFHFVNSTGEEIELV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaatgaattaataataaattcgactccacagggatcccggattgccttactaaga
gacaagcgattggtagagtatcatcaggaaagtgatgatcatcaatttaatgttggagat
atatatttaggcactgtaaagaaaatcgtacagggcctaaatgctgcttttattgatgtc
ggctacgagaaagatgcgtttttgcactatctcgatttaggcccgcaagtgcagtcgttg
aataagttcacacggcttgtacttacaaacaaaaatataagccacaaactggcaggcttt
aaacccgaaaaagatattgataagcttggcaaaatcagccaggtgctcgtcaagggtcaa
aagatacttgtacaggttgtaaaagaaccaatctccacaaaaggcccccggctttcttgt
gaattgtccctggcgggacggtacttagttcttgtaccattctcaaatactgtcaatgtt
tctaagaaaattgacagcagcgatgagcgcaaacgacttgttcgtttggtgtcgtctatt
aaatccgaaaactttggtgttatcatcaggactgtcgctcagggcaaagatgttgctgag
ctcgacaaggacttaagaaaccttgtttccatttgggaggaagggatgaaaaacctgaag
acagcacaatcgaaggacaagatcatcggcgaaatgagccggacaaactctattctgaga
gatgtcctcaacgagtcgttcgatgctatccacatcgatgacaaaaagacctttgcagat
gtccgagcctacgttaacaagatagctcccgacaaagaaaaaatcctcagacaatacacc
ggtaaggttaaaatatttgagcatttccatgtagaaaaacagctcaagatgtcatttggc
cgttccgtaagtgtagccggaggaggctatttgatcattgagcataccgaagcgcttcac
gtaattgacgttaacagcggcaacaagtcgaacgccgaagaagaccaggagtcgacggct
ttgcgtgtaaacatggacgctgcatcggaaatagccagacagctccggctgagggacatg
ggtggtatcatcgtaatcgacttcattgacctcaaaaagcaggacaatcgtaagaaggtt
tatgaacggatgaagcaggagatgagcaccgatcgctcaaagtatacagtgcttccccta
tcaaagtttgggctgatgcaaattacccggcagcgggtaaggcctgagatgaatatagct
accagggaggtttgccctacctgcaacgggacgggtaaaattaccgcttcagtgattgta
gctgaccaaatagaaaagaatatcgaacacatttttggcaagcaaaatgagaagaagctt
accataagtcttcatccttatttgtttgcgtacttcactaaaggcatttactcgaagaga
gtgcagtggttcatgaagtactataaatgggttcatttgattgaggactcatcactaggc
ctgacggatttccactttgttaattctacaggagaagaaatagagctggtctaa
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