Imperialibacter roseus: RT717_25865
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Entry
RT717_25865 CDS
T09469
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
iro
Imperialibacter roseus
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
iro03009
]
RT717_25865 (rimO)
Enzymes [BR:
iro01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RT717_25865 (rimO)
Ribosome biogenesis [BR:
iro03009
]
Prokaryotic type
ribosomal protein modification factors
RT717_25865 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WOK06504
LinkDB
All DBs
Position
complement(6160084..6161394)
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AA seq
436 aa
AA seq
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MKTKGLKNTKVNIVTLGCSKNSVDSEVLLTQLRGNEIDAVHESEDDDSNVVVINTCGFID
NAKQESIDTILRYVDAKKEGLVEKIYVTGCLSQRYKDDLEKEIPEVDAYFGTRDLSRLLK
EFKADYKHELVGERILTNPAHYAYMKISEGCDRPCSFCAIPLMRGGHISRPIEELVKEAA
HLAKNGTKELLLIAQDSTYYGLDLYKKRNLAELLQRLSDVNGIDWIRLHYAFPAGFPMDA
LDVMAERPNICNYVDIPLQHASNNMLKMMRRGTTREKTEDLLATMRSKVPGIAIRTTLIA
GHPGETEQDFEEMMDFVQKSKFDRLGVFNYSHEENTHSYSFEDNIPENVKQERADAVMEV
QEAISYELNQQKIGKTFKVLVDRKEGGNFIGRTEYDSPEVDNEVIIDGKENYLRIGDFAT
VKIYDAAEFDLFGELL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaactaaaggactaaaaaatacgaaagtgaacatcgttaccctggggtgttccaaa
aactctgttgattcggaagttttgcttacccaactgcggggcaacgaaattgacgctgtg
cacgaatctgaggatgacgattctaatgtggttgtgattaacacttgtggctttattgac
aatgccaagcaagaatccatcgacaccattctgcgctatgtagatgcgaaaaaggaagga
ctggttgaaaagatatatgtgacgggttgtctctcacaaagatataaagacgacctggag
aaggagattccggaagtggatgcctattttggcacgagagatttgtcgaggcttttgaag
gagttcaaagccgactacaagcacgaactggtgggtgagaggattttgaccaaccctgct
cactacgcctacatgaaaatatcggagggttgcgacaggccgtgttcattctgcgcaata
ccgctgatgcgtggcggccatatttcccggcctattgaagaattagtgaaagaagcggcc
catttagccaagaatggcactaaagaacttttgcttatcgcccaggactcaacctactat
ggcctggatttgtacaagaaaagaaacctggcggagctgctgcaacgcctttcggatgtc
aatggcatcgactggatccgtctgcactacgcatttccggctggcttccctatggatgca
cttgatgtaatggcagagcgccctaacatttgcaactacgtagacatcccccttcagcat
gcttctaacaacatgttgaagatgatgaggcggggcaccacccgggagaaaaccgaagac
ctgctggccaccatgcgctctaaagttccgggcatcgccatccgcactacgctgattgct
ggccatcctggtgaaacggagcaggattttgaagagatgatggattttgttcagaagtcg
aagtttgacaggctgggggtgttcaactactcacatgaagaaaacacccactcatatagc
tttgaagacaatattcctgaaaatgttaaacaagaacgggccgatgccgttatggaggtg
caggaagccatttcctacgagctgaaccagcagaaaataggcaagacctttaaagtgttg
gtggatcgcaaagaaggtggtaatttcatcggtcgaacagagtatgactcacccgaagtt
gacaacgaagtcatcattgatggaaaagaaaattatttacgtattggcgatttcgccaca
gttaagatttatgatgctgccgaattcgatttgtttggagaattgttgtaa
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