Imperialibacter roseus: RT717_26460
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Entry
RT717_26460 CDS
T09469
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
iro
Imperialibacter roseus
Pathway
iro02020
Two-component system
iro02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RT717_26460 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RT717_26460 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iro03021
]
RT717_26460 (rpoN)
Transcription machinery [BR:
iro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RT717_26460 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_12
SF3b1
HTH_IclR
LacI
Tma16
MarR
Motif
Other DBs
NCBI-ProteinID:
WOK06622
LinkDB
All DBs
Position
6298603..6300045
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AA seq
480 aa
AA seq
DB search
MQKLGLTQSLSQKLSPQQIQFIKLLQVPTAELETRIEEELEINPALEEGKEEEPKEADDF
DDIDNSASDELNIDEYLPDDDYAGYKMQGDGPGGDEEEREVPFSESSTLSEQLISQLGFL
KLDERQYAIGRQLIGSIEADGYIRRDLDAIVNDMAFSQNIECEADEVEEILHLIQEFDPA
GIGARSLQECLQLQIDRKIETGGEVAQLAHHVVTDCFDEFTKKHYDKISKKLELEDDELL
KEAIKLITHLNPKPGGVGSGLVKTQYLIPDFMLFNNHGNLELSLNSRNAPELKVSRDYSE
MLQAYDKSNKKDKKLKETVTFVKQKLDSAKWFIDAIKQRQQTLLNTMNSIIKYQYDFFLE
GDESKLRPMILKDIAEEIGMDISTVSRVANSKTIQTEFGIYPLKYFFSEGISTDSGDDVS
SREVKHFLKEMIDAEEKRKPLSDDKLEKLLKKKGYQIARRTVAKYREQLNIPVARLRKEL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagctgggcttaacccaatctctgagtcagaagctgtcgccgcagcagattcag
ttcattaagctcctgcaagtaccgacggcggaactggagaccaggatcgaagaggaattg
gagatcaatcctgcgttggaggaaggtaaggaggaggagcctaaagaggcagatgatttt
gatgatatagacaattcggcaagcgacgaactgaacattgacgaatacttgcccgacgac
gactacgccggttataaaatgcagggtgacggccccggtggcgatgaagaagaacgtgaa
gtgccatttagtgaaagctccacactgtcagagcaactgatttctcaactcgggtttctc
aagctggacgagcgtcagtacgccattggccggcagctgataggcagtattgaggccgac
ggatacatcaggcgagacctggatgccatagttaacgacatggccttttctcagaacata
gagtgtgaggccgatgaagtggaagaaatccttcatttgatccaggaatttgacccggct
ggcataggagcccgttctttgcaggagtgtttgcagttgcagatcgaccggaaaatagaa
actggcggtgaagtagcgcaactggcacatcatgtagtgacagactgctttgatgagttt
accaaaaagcactacgacaagatttcaaagaagcttgaacttgaggatgatgagttgctg
aaggaggcgattaagctcattacccacctcaatccaaagcccggcggcgtagggtctggc
cttgttaaaacccagtacctcattcccgactttatgcttttcaataatcatggcaacctg
gagctgtcattgaattccagaaatgcgccggagctgaaggtgagccgggactattcagaa
atgcttcaggcctacgataagagcaacaagaaggacaagaaactcaaggagactgtcact
tttgtgaaacaaaagcttgactcagcaaagtggtttatcgacgccattaagcagcgccag
caaacgctgctcaatacaatgaactcgattattaagtaccagtacgactttttccttgaa
ggagacgagagcaagctgaggccaatgattttgaaagatatagcggaagagataggcatg
gatatttccacggtgtcgagggtggctaactccaaaactatccaaacagaattcggtatt
tatccattgaagtatttcttttctgaagggatttctactgactctggcgacgatgtgagt
agccgagaggtcaagcatttcttaaaggaaatgattgacgccgaagaaaagcgcaaacca
ctgtcggacgataaacttgaaaaattgcttaaaaagaaggggtatcaaatcgccaggcga
actgtagccaaataccgggaacaactaaatattcctgtggccagattaaggaaggagctc
tag
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integrated database retrieval system
