Imperialibacter roseus: RT717_27415
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Entry
RT717_27415 CDS
T09469
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
iro
Imperialibacter roseus
Pathway
iro00010
Glycolysis / Gluconeogenesis
iro00020
Citrate cycle (TCA cycle)
iro00260
Glycine, serine and threonine metabolism
iro00280
Valine, leucine and isoleucine degradation
iro00310
Lysine degradation
iro00380
Tryptophan metabolism
iro00620
Pyruvate metabolism
iro00630
Glyoxylate and dicarboxylate metabolism
iro00640
Propanoate metabolism
iro00670
One carbon pool by folate
iro00785
Lipoic acid metabolism
iro01100
Metabolic pathways
iro01110
Biosynthesis of secondary metabolites
iro01120
Microbial metabolism in diverse environments
iro01200
Carbon metabolism
iro01210
2-Oxocarboxylic acid metabolism
iro01240
Biosynthesis of cofactors
Module
iro_M00009
Citrate cycle (TCA cycle, Krebs cycle)
iro_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
iro_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
iro_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RT717_27415 (lpdA)
00020 Citrate cycle (TCA cycle)
RT717_27415 (lpdA)
00620 Pyruvate metabolism
RT717_27415 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
RT717_27415 (lpdA)
00640 Propanoate metabolism
RT717_27415 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RT717_27415 (lpdA)
00280 Valine, leucine and isoleucine degradation
RT717_27415 (lpdA)
00310 Lysine degradation
RT717_27415 (lpdA)
00380 Tryptophan metabolism
RT717_27415 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RT717_27415 (lpdA)
00670 One carbon pool by folate
RT717_27415 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
iro04147
]
RT717_27415 (lpdA)
Enzymes [BR:
iro01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
RT717_27415 (lpdA)
Exosome [BR:
iro04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
RT717_27415 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
DAO
HI0933_like
FAD_oxidored
FAD_binding_2
Lys_Orn_oxgnase
NAD_binding_8
FAD_binding_3
Amino_oxidase
2-Hacid_dh_C
GIDA
3HCDH_N
Thi4
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
WOK06801
LinkDB
All DBs
Position
6497689..6499083
Genome browser
AA seq
464 aa
AA seq
DB search
MATKYDLIVIGSGPGGYVAAIRASQLGMKVGVVERDELGGICLNWGCIPTKALLKSAQVF
EYINHAKDYGISVKGAEADFDGMVKRSRDVANGMSKGIQFLFKKNKIDHIEGFGKLKKNK
TVEVTAKDGKKTDYQADHIIVATGGRSRELPALPIDNEKIIGYRKAMTLDKKPQSMVVVG
SGAIGVEFAYFYKSIGVDVTIVEFLPNIVPLEDEEVSKQLERIFKKAGMTIMTNSEVTKV
DTKGKKCKVTVKTQKGEENLECDVVLSAVGISTNLEGIGLEDVGVATDRGKVLVDDYYKT
NIPGIYAIGDIVKGQALAHVASAEGIICVEKIAGHHPEPLDYNNIPGCTYCSPEVASVGY
TEKAAKEAGYELKVGKFPFSASGKAKAAGAADGFVKLIFDAKYGELLGAHMIGANVTEMI
AEIVTARKLETTGHEIIKSVHPHPTMSEAVMEAAAAAYDEVIHL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggctacgaaatacgatttgattgttattgggagtggacccggaggctatgtggccgct
atcagggcctctcaactgggaatgaaagtaggtgtggtagaacgtgacgagctgggcgga
atttgcctcaactggggctgtatacctaccaaagccttactgaaaagtgcccaggtattt
gaatatatcaatcatgccaaggactacggcatctcagtaaaaggcgccgaggccgatttt
gacgggatggtgaagagaagccgggatgtagccaacggaatgagcaaaggcatccagttc
cttttcaaaaagaataaaatcgatcacatcgaaggattcggtaagctgaagaaaaacaag
acagttgaagtaactgccaaagacggcaagaagactgactaccaggctgaccatatcata
gtggcaaccggaggtcgttcacgtgaattgccggcattgcccatcgataatgaaaaaatt
atcggctacagaaaggccatgactcttgataagaaaccacagagcatggtggtggttggc
tcaggggctatcggtgtagagtttgcgtacttctacaagtcaattggcgtggatgttact
atcgtagagtttctacccaatattgttccgctcgaagacgaggaagtgtcgaaacaattg
gagagaatcttcaaaaaagctggcatgaccatcatgaccaactcggaagtaaccaaagtt
gacaccaaaggcaagaagtgcaaagtgactgtgaaaacgcagaaaggtgaagaaaacctt
gagtgcgatgtggtactgtctgccgtagggatttctaccaatcttgagggaataggtttg
gaagacgtgggcgttgctaccgacagaggtaaagtgctggtagatgactactacaaaacg
aatatcccgggcatttacgccatcggcgatattgtgaagggccaggcgctggcgcacgtt
gcatctgctgagggtattatctgcgtagagaaaattgcagggcatcatcctgaaccgctg
gattacaacaacatccctggttgtacctactgctcaccagaagtggcttctgtaggctac
accgaaaaggctgctaaagaagccgggtatgagctcaaagttggcaagtttccattctcg
gcgtcaggcaaagccaaagctgctggcgcagccgacggattcgtgaaattaatttttgat
gccaaatatggcgagctcctcggtgcccatatgattggcgccaacgtgacagaaatgatc
gctgaaattgttacggcgagaaagctggagaccactggtcatgaaattatcaagtcggta
caccctcacccgaccatgtcggaagcggtgatggaagcagcagcagctgcttacgacgag
gtaatccacctgtaa
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