KEGG   Imperialibacter roseus: RT717_27415
Entry
RT717_27415       CDS       T09469                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
iro  Imperialibacter roseus
Pathway
iro00010  Glycolysis / Gluconeogenesis
iro00020  Citrate cycle (TCA cycle)
iro00260  Glycine, serine and threonine metabolism
iro00280  Valine, leucine and isoleucine degradation
iro00310  Lysine degradation
iro00380  Tryptophan metabolism
iro00620  Pyruvate metabolism
iro00630  Glyoxylate and dicarboxylate metabolism
iro00640  Propanoate metabolism
iro00670  One carbon pool by folate
iro00785  Lipoic acid metabolism
iro01100  Metabolic pathways
iro01110  Biosynthesis of secondary metabolites
iro01120  Microbial metabolism in diverse environments
iro01200  Carbon metabolism
iro01210  2-Oxocarboxylic acid metabolism
iro01240  Biosynthesis of cofactors
Module
iro_M00009  Citrate cycle (TCA cycle, Krebs cycle)
iro_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
iro_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
iro_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:iro00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RT717_27415 (lpdA)
   00020 Citrate cycle (TCA cycle)
    RT717_27415 (lpdA)
   00620 Pyruvate metabolism
    RT717_27415 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    RT717_27415 (lpdA)
   00640 Propanoate metabolism
    RT717_27415 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RT717_27415 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    RT717_27415 (lpdA)
   00310 Lysine degradation
    RT717_27415 (lpdA)
   00380 Tryptophan metabolism
    RT717_27415 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RT717_27415 (lpdA)
   00670 One carbon pool by folate
    RT717_27415 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:iro04147]
    RT717_27415 (lpdA)
Enzymes [BR:iro01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RT717_27415 (lpdA)
Exosome [BR:iro04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RT717_27415 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 DAO HI0933_like FAD_oxidored FAD_binding_2 Lys_Orn_oxgnase NAD_binding_8 FAD_binding_3 Amino_oxidase 2-Hacid_dh_C GIDA 3HCDH_N Thi4 Lycopene_cycl
Other DBs
NCBI-ProteinID: WOK06801
LinkDB
Position
6497689..6499083
AA seq 464 aa
MATKYDLIVIGSGPGGYVAAIRASQLGMKVGVVERDELGGICLNWGCIPTKALLKSAQVF
EYINHAKDYGISVKGAEADFDGMVKRSRDVANGMSKGIQFLFKKNKIDHIEGFGKLKKNK
TVEVTAKDGKKTDYQADHIIVATGGRSRELPALPIDNEKIIGYRKAMTLDKKPQSMVVVG
SGAIGVEFAYFYKSIGVDVTIVEFLPNIVPLEDEEVSKQLERIFKKAGMTIMTNSEVTKV
DTKGKKCKVTVKTQKGEENLECDVVLSAVGISTNLEGIGLEDVGVATDRGKVLVDDYYKT
NIPGIYAIGDIVKGQALAHVASAEGIICVEKIAGHHPEPLDYNNIPGCTYCSPEVASVGY
TEKAAKEAGYELKVGKFPFSASGKAKAAGAADGFVKLIFDAKYGELLGAHMIGANVTEMI
AEIVTARKLETTGHEIIKSVHPHPTMSEAVMEAAAAAYDEVIHL
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggctacgaaatacgatttgattgttattgggagtggacccggaggctatgtggccgct
atcagggcctctcaactgggaatgaaagtaggtgtggtagaacgtgacgagctgggcgga
atttgcctcaactggggctgtatacctaccaaagccttactgaaaagtgcccaggtattt
gaatatatcaatcatgccaaggactacggcatctcagtaaaaggcgccgaggccgatttt
gacgggatggtgaagagaagccgggatgtagccaacggaatgagcaaaggcatccagttc
cttttcaaaaagaataaaatcgatcacatcgaaggattcggtaagctgaagaaaaacaag
acagttgaagtaactgccaaagacggcaagaagactgactaccaggctgaccatatcata
gtggcaaccggaggtcgttcacgtgaattgccggcattgcccatcgataatgaaaaaatt
atcggctacagaaaggccatgactcttgataagaaaccacagagcatggtggtggttggc
tcaggggctatcggtgtagagtttgcgtacttctacaagtcaattggcgtggatgttact
atcgtagagtttctacccaatattgttccgctcgaagacgaggaagtgtcgaaacaattg
gagagaatcttcaaaaaagctggcatgaccatcatgaccaactcggaagtaaccaaagtt
gacaccaaaggcaagaagtgcaaagtgactgtgaaaacgcagaaaggtgaagaaaacctt
gagtgcgatgtggtactgtctgccgtagggatttctaccaatcttgagggaataggtttg
gaagacgtgggcgttgctaccgacagaggtaaagtgctggtagatgactactacaaaacg
aatatcccgggcatttacgccatcggcgatattgtgaagggccaggcgctggcgcacgtt
gcatctgctgagggtattatctgcgtagagaaaattgcagggcatcatcctgaaccgctg
gattacaacaacatccctggttgtacctactgctcaccagaagtggcttctgtaggctac
accgaaaaggctgctaaagaagccgggtatgagctcaaagttggcaagtttccattctcg
gcgtcaggcaaagccaaagctgctggcgcagccgacggattcgtgaaattaatttttgat
gccaaatatggcgagctcctcggtgcccatatgattggcgccaacgtgacagaaatgatc
gctgaaattgttacggcgagaaagctggagaccactggtcatgaaattatcaagtcggta
caccctcacccgaccatgtcggaagcggtgatggaagcagcagcagctgcttacgacgag
gtaatccacctgtaa

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