Ignavigranum ruoffiae: M0R79_01995
Help
Entry
M0R79_01995 CDS
T08083
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
iru
Ignavigranum ruoffiae
Pathway
iru03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
iru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M0R79_01995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iru03021
]
M0R79_01995
03400 DNA repair and recombination proteins [BR:
iru03400
]
M0R79_01995
Enzymes [BR:
iru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M0R79_01995
Transcription machinery [BR:
iru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M0R79_01995
DNA repair and recombination proteins [BR:
iru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M0R79_01995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
UPQ86172
LinkDB
All DBs
Position
228681..229625
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPEITTIEVSDDDKFGKIVIEPLERGYGTTLGNSLRRILLSSLPGSAITSIQIDS
VLHEFQTIDGVTEDVGAIILNLKQLALKLHTEEDKVIELNVTGPKVVTAADIIHDNEVQI
LNPDLYICTLAEDAELKMQMNVSNGRGYVRSEHNKREDMPIGVLAIDSIYTPIKKVNYTV
ENTRIGQKNLYDKLTMDIWTDGSISPESSLSLAAKILIEHLNVFMNLNEEARDVEIMVEK
EETEKEKVLVMTIEELDLSVRSYNCLKRAGINTIQELTNKSESEMMKVRNLGRKSLAEVK
GKLSDLGLGLRDED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaattgaaaagccagagattactacaattgaagtcagtgacgatgacaaattt
ggaaaaatcgtgattgaaccactagaacgtggttatggaacaacccttggaaactcatta
cgacgtattttattatcttcattacctggttcagccattacaagtatccaaatcgacagt
gtacttcatgaatttcaaaccattgatggagtaactgaagatgtaggtgcaattattctg
aacctaaaacaacttgctctaaaattacatactgaagaagataaagtgattgaattaaat
gttactggtcctaaagtggtaacggcagcagatattattcatgacaatgaagttcagatt
ctcaacccggatttatatatttgtaccttggctgaggatgccgagttaaagatgcaaatg
aatgtatccaatggtcgaggctatgttcgtagcgaacataacaaacgagaagatatgcca
attggtgtattagccattgactcaatctatacgcccattaagaaggttaattatacggtt
gagaacacgcgtattggtcaaaagaacctctatgataaattaacgatggatatttggact
gatggatcgatttctcctgaatcttctttaagtttagccgccaaaattcttatcgagcac
ttaaatgtctttatgaatctaaatgaagaagcgcgcgatgttgaaattatggttgaaaaa
gaagaaacagaaaaagaaaaagtcctagttatgaccatcgaagaacttgatctttctgta
cgttcttataactgcttgaaacgtgcaggcatcaatactattcaagaactcaccaataaa
tccgaatcagaaatgatgaaggttcgtaatttaggtcgcaaatcacttgccgaagttaaa
gggaaattatctgacttaggcttaggattacgtgatgaagactag
DBGET
integrated database retrieval system
