Ignavigranum ruoffiae: M0R79_02515
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Entry
M0R79_02515 CDS
T08083
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
iru
Ignavigranum ruoffiae
Pathway
iru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
iru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M0R79_02515 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iru03400
]
M0R79_02515 (uvrA)
DNA repair and recombination proteins [BR:
iru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M0R79_02515 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M0R79_02515 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
RsgA_GTPase
AAA_16
AAA_29
AAA_21
AAA_23
AAA_33
DnaJ_CXXCXGXG
nSTAND3
AAA_22
BCA_ABC_TP_C
APS_kinase
Viral_helicase1
AAA_24
cobW
MMR_HSR1
DUF4350
Motif
Other DBs
NCBI-ProteinID:
UPQ86270
LinkDB
All DBs
Position
126263..129085
Genome browser
AA seq
940 aa
AA seq
DB search
MHDKITVRGARTHNLKNINIEIPKNKLVVMTGLSGSGKSSLAFQTLYAEGQRRYVESLSA
YARQFLGQMDKPDVDSIEGLSPAISIDQKTTSHNPRSTVGTATEINDYLRLLYARTGVPY
CPNHHIPIEKQSPEQMVNQIMTLPERTKIQILSPLIRDQKGQHKKIFEQIIKDGYVRVRV
DGEIYDVTEVPELTKTKKHTIEVVVDRLVMKEGIRGRVFDSVEVALNYSQGYVIINVIGG
EDLFFNEHFACPYCDFTVDELQPRLFSFNAPYGACPACDGIGFKLSVDEELVIPDESLSL
MEGAFHPWSPNNSAYYSSMLEQFASSQNIPLDIPYKDLSKRQQDLLKYGSEQIRFKFTYK
PLHGGGQKTVDSKFEGVMNNIERRYHQTSSEYVRESMRDYMHELVCPVCKGQRLNPMALS
VKVGDKNIAEVSELSIEDALKHFDQLEFGEEKAMIAKPILKEINDRLTFLNNVGLNYLNL
SRMAGTLSGGEAQRIRLATQIGSNLSGVMYVLDEPSIGLHQRDNRKLINSLKQMRDLGNS
LIVVEHDEETMLDADYIIDIGPGAGEKGGEIVAQGTPKQVMRNKQSLTGQYLSGKLSIPV
PKERRSEDQGWVKITGASENNLKNVDIAFPLGRFTVVTGVSGSGKSSLVNRILKIALIKR
TTSTKEKPGKFKDITGWEGLDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAKTNGAK
QRGYDKGRFSFNVKGGRCEACKGAGIKEIEMNFLPNIEVPCEVCHGRRYNSETLEIEYKG
KNISQVLDMTIDEALEFFEAIPKIHRKLQTLIDVGLGYVRLGQSATTLSGGEAQRMKLAS
ELQRVATGDTFYILDEPTTGLHAHDIKKLLKVLDRLVEAGNTVVVIEHNLDVIKTADYLI
DLGPEGGVAGGEIIATGTPEEVAQVAKSYTGQYLVDILKD
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacaaaataactgttcgtggggcccgaacccacaatctaaaaaatataaatatt
gaaattcctaaaaataaacttgtagtgatgactggactatcagggtcaggtaaatcctct
ttagcctttcaaaccctctatgccgaaggtcaacggcgttacgttgagagcttatctgct
tatgcgcgacaattcctaggtcagatggataagccggatgttgattccattgaaggtctc
tccccagctatttcgattgaccaaaagacaaccagtcataatccacgatcgacggtcggg
acagcaactgagattaatgattatctgcgtttactttatgcgcgaactggcgtcccttat
tgtcctaaccaccatattccaattgaaaagcaatcacctgaacaaatggttaatcaaatt
atgaccctccctgaacggacgaagatacaaatattaagtccactgattcgtgatcaaaag
ggccaacataagaaaatttttgaacagattattaaagatggttatgttcgggtccgcgtc
gatggtgaaatatatgacgtgactgaagtgcctgagctgaccaagactaagaaacacaca
atagaagtggttgtagaccggctagtgatgaaagaaggcatccgtggtcgtgtctttgat
tcagtggaagtagccctgaattattcacaaggttatgtgattataaatgtgatcggtggc
gaagatttattctttaatgaacattttgcctgtccctactgtgatttcaccgttgatgag
ttgcaaccgcgcctattctcgtttaatgcgccttatggagcttgtccagcctgtgatgga
attggttttaaactttctgtggatgaagaattggttattccggacgagtccttatcttta
atggaaggagcctttcatccttggagccccaacaactcagcctattattcttcaatgcta
gaacaattcgccagttcacaaaatataccgttagatattccttataaggatctatcaaaa
cgccaacaagatttgctgaaatacggttcagagcaaatccgctttaaattcacgtataaa
cccttacatgggggcggacaaaagacggtcgacagtaaattcgaaggcgttatgaataat
attgaacgacgttatcatcaaacttcttccgaatatgttcgtgaatcgatgcgtgactat
atgcatgaattggtatgtccagtatgtaaagggcaacggttgaatccaatggcactctcg
gtcaaagtcggtgacaagaatattgccgaagtgtccgaattatcaattgaagatgcgttg
aagcatttcgatcaattggaatttggcgaagagaaggctatgattgctaaaccgattctc
aaggagattaatgatcgtctaactttcttaaataatgtgggactgaattacttaaacttg
agtcgcatggcggggaccttgtctggtggagaagcacaacggattcgcttagctactcaa
attggatcgaacctgagtggagtaatgtacgtcttagatgaaccttcgattggtcttcat
caacgagataatcgtaaattaattaattccttgaaacaaatgcgtgatctggggaattca
ttaattgtcgttgagcatgatgaagaaacaatgctggacgcggattatattattgatatt
ggtccgggtgccggtgagaagggtggcgaaatcgtcgcgcaaggaacccctaaacaggtg
atgcgaaacaagcaatccttaacaggtcaatacttatcgggtaaattatcaatccccgtt
ccgaaagaacgacggagtgaagatcaaggctgggtgaagattaccggagccagtgagaat
aacttgaagaatgttgatatagctttccctttgggtaggtttacggtcgtaacgggtgtt
tcaggatcgggtaaatcaagtttagtgaatcgcatcttaaagattgctttaataaaacgg
actacttcaacgaaagagaaacccggaaaattcaaagatattaccggttgggaaggcttg
gataaggtcattgatattgaccaaagcccaatcggtcggaccccgcgctctaatccagcc
acctacaccggagtatttgacgatattcgtgatttgttcgctaagacgaatggagctaaa
caaagaggttatgataagggacgttttagttttaatgtcaagggaggacgttgtgaggcc
tgtaaaggagctggaattaaagaaatcgagatgaacttcttaccaaatattgaagtacct
tgtgaggtctgccatggccgccgctataattcagaaaccttagaaattgaatataaaggc
aagaatatttctcaagtcttagatatgacgattgatgaagccttggaattctttgaagca
attcctaaaatccatcgtaaattacaaacattgattgatgtcggtctaggctatgttcga
ttaggtcagtccgcgaccacactttctggtggagaggcccaacggatgaaattagcttct
gaactgcaaagagtggccacaggggatactttctatatcttagatgagcctaccactggt
ctgcatgcgcatgatattaagaagttattaaaggttctggatcggttggtcgaagcggga
aatacggttgtagttattgaacacaatctagatgtcattaaaacagcggattatttaatc
gacttaggacccgaaggtggggtggctggtggagagatcatagccactggcacgcctgaa
gaagtagcgcaagttgctaaatcttatactggacaatatctggttgatattctgaaagat
taa
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