Ignavigranum ruoffiae: M0R79_03100
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Entry
M0R79_03100 CDS
T08083
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
iru
Ignavigranum ruoffiae
Brite
KEGG Orthology (KO) [BR:
iru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iru03032
]
M0R79_03100 (gyrA)
03400 DNA repair and recombination proteins [BR:
iru03400
]
M0R79_03100 (gyrA)
Enzymes [BR:
iru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
M0R79_03100 (gyrA)
DNA replication proteins [BR:
iru03032
]
Prokaryotic type
DNA Topoisomerases
M0R79_03100 (gyrA)
DNA repair and recombination proteins [BR:
iru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M0R79_03100 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
UPQ86375
LinkDB
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Position
6217..8742
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AA seq
841 aa
AA seq
DB search
MTLENIDFTPRDDYEKVDLPKEMRKSFLDYAMSVIVSRALPDVRDGLKPVNRRILYGMSE
LGVTPDKPHKKSARIVGDVMGKYHPHSDSAIYEAMVRMAQDFSYREMLVDGHGNFGSVDG
DGAAAMRYTESRMSKIALEMLRDINKDTVDFQDNYSQEEREPVVLPARFPNLLVNGAAGI
AVGMATNIPPHNLSEVIDAIILLIKNPEATLDQILEVLPGPDFPTGAMIMGRAGIKKAYK
TGQGKILVRSKIEIEELAHDRERIIITEIPYGVNKANLVKKIAELARDKKIEGITYANDE
SSRDGMRIVIEVRRENSAAVVINNLYKYTQLQTTFGINMLAIDQGVPKILSLKEILQKYI
EHQEIVIRRRTEFEKKKAEDRAHILEGLRIALDHIDEIISIIRSSHDSEVAKAQLIERFS
LTDIQAQAILDMRLVRLTGLERDKIEEEYKSLLELIARLTEILENKDRLYEIIQDELIEI
RDRFGNPRRTEIVSGEIIDIEDEDLIPEEDILIALTTNGYVKRMTNDEFHVQNRGGRGVK
GMTLADNDRIQNLVSCSTHDTLLFFTNYGKVYRAKGFDIPEFGRQAKGLPIVNLLNIEQD
EVVKEVIAVKPREEETGYSERERYLFFITRDGTVKRSLAQEYFNIRTNGLIAINLKDEDE
LINVIETDGHAAIVIGTHEGNATVFPEEEVRVMGRTATGVRGIKLRSADYVIGGASLAAN
QHVLVVSEKGYGKKTLAEEYSIKHRGGFGVKTANISEKSGKLAGILVTDGSEDLLIMTNQ
GVAIRIDSNDIPESSRATLGVKVIRMNSDSIVSSVTKIIAEEDDADDLEDSNEESESNSA
E
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgactttagaaaatattgacttcaccccacgcgatgattatgaaaaagtagacctacca
aaagaaatgcgtaagtcatttcttgattatgctatgagtgtcattgtttctcgtgccctg
cctgacgtgcgtgatggcttaaaaccagtcaaccgtcgtattctttatggtatgagtgaa
ctaggtgtgacgccagataaacctcataaaaaatcggcccggattgtcggtgatgtgatg
gggaaatatcatcctcatagtgattcagcaatctatgaagcgatggtaagaatggcacaa
gatttctcttatcgggagatgctagttgacggacatggaaacttcggttcggtcgacggt
gatggggctgcggccatgcggtatacagagtcgcgaatgagtaaaattgctctggaaatg
ttgagagatattaacaaggacacggttgattttcaggacaattattctcaagaagagcgt
gaaccggttgttctgccggcacgcttccctaatttactggtcaatggggccgctggaatt
gctgtcggtatggctactaatattccgcctcataacttgtcagaggtcattgatgctatt
attttattaataaagaacccagaagctactttggatcagattctagaagttttacccgga
ccggattttcctaccggagcgatgattatgggtcgagccggtattaaaaaagcctataaa
acaggtcaaggcaagattttagttcgctcaaaaatagaaattgaagagttagctcatgat
cgcgaaagaattattatcactgaaataccctatggggtaaataaagccaatctcgttaaa
aaaattgctgaattggctcgggataaaaaaattgaaggaatcacatacgctaatgatgaa
tctagtcgtgatggtatgcggattgtgattgaagttcgacgtgaaaattcagcagcagtg
gtcattaataatttatacaaatatactcaattacaaactacctttggcattaatatgttg
gcaattgatcaaggggttccaaagatattaagccttaaagaaattttacaaaaatatatt
gagcaccaagaaattgtgattcggcggagaaccgaatttgagaagaaaaaagctgaagat
cgagctcatattttagaaggtttacgcattgccctagaccatattgatgaaattatttca
attatccgctcatcccatgatagtgaggtagctaaagctcaattgattgaacgttttagt
ttgactgatatccaagctcaagcaattttagatatgcgtttggtgcgcttaacaggttta
gagcgagacaaaattgaagaagaatataagtcactattggaacttattgctcgtttaact
gaaatcttggaaaataaagatcgtctctatgaaattatccaagatgaattaattgaaatt
cgagatcgatttggtaatccgcgtcgaaccgagattgtttcaggagaaattatcgatata
gaggatgaagatttaatccccgaagaagatattttgatagctttaacgaccaatggttat
gttaaacggatgactaatgatgaattccatgttcagaatcgtggaggacgtggggttaag
ggaatgaccttagccgataacgaccgtattcagaacctagtttcttgttcaacccatgat
actctgctattctttactaattatgggaaagtttatcgagccaaaggattcgatattcca
gaatttggtcgacaagctaaaggcttacctatagtgaatttattgaatatcgaacaagat
gaagttgttaaagaggtcattgctgttaaaccgagagaagaagagactggttattctgaa
cgagaacgctatttgttctttattacccgtgatggaaccgtgaaacgtagtctggctcaa
gaatattttaatattcggacgaatggtctgattgcgattaatttgaaagatgaagatgag
ttaattaatgtgattgaaaccgatggtcatgcagcgatagttattggaactcatgaagga
aatgccaccgtcttccctgaagaagaagttagagtcatgggtcggaccgctactggcgtt
cgtggcattaaattaagatcggctgattatgtgattggaggagcttcattagctgccaat
caacacgtcctggtagtcagtgaaaaaggatatggtaaaaagacccttgctgaagaatat
tcaattaaacatcggggcggctttggcgtaaaaacagccaatatttctgaaaaaagtgga
aaattagccggtattctagtgactgacggtagtgaagacttattaattatgaccaatcaa
ggggtagctattcgcatagatagtaatgatattcctgaatcatctcgcgccactcttgga
gtgaaagtgattcggatgaattcagattccattgtatcttcggtcacaaaaattattgct
gaagaagatgatgctgatgatttagaagattcaaatgaagaaagtgagtcaaattcagca
gaataa
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