Ignavigranum ruoffiae: M0R79_03840
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Entry
M0R79_03840 CDS
T08083
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
iru
Ignavigranum ruoffiae
Pathway
iru03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
iru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M0R79_03840 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iru03021
]
M0R79_03840 (rpoE)
03400 DNA repair and recombination proteins [BR:
iru03400
]
M0R79_03840 (rpoE)
Transcription machinery [BR:
iru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M0R79_03840 (rpoE)
DNA repair and recombination proteins [BR:
iru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M0R79_03840 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
SnoaL_2
Motif
Other DBs
NCBI-ProteinID:
UPQ86516
LinkDB
All DBs
Position
complement(1810871..1811530)
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AA seq
219 aa
AA seq
DB search
MELKKFAGQNKEELSMVEVAHALLEETGEVYDFTQLLVTIQEYLEISEEDLEKRMARFYT
DINIDGRFISLGENRWGLRAWYPIDSIDEEIVGTIDDEDLPRRRRRKKTNKINAFGDGED
IIDYNEDDPEDIDDIYDEDYELEDDEDEEDDELEGLTEIEDEDEEDPELKDYAGDLSEFG
DDEIDLESDTSFEDEDDEFFDEEEDETEEEVLPEESEEE
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggaattgaagaagttcgcaggacaaaataaagaagaattatcgatggtcgaagttgcc
catgcactattagaagaaacgggcgaggtatatgattttacccagttattagtgaccatc
caagaatatcttgaaataagtgaagaagatttagaaaagcgtatggcacgattctataca
gatatcaacattgatggtcgttttatttctttgggagagaatcgttggggcttaagagct
tggtatccgattgattcaattgatgaagaaattgtcggtacgattgatgatgaagatcta
ccccgtcgacgccgccggaagaaaaccaacaaaatcaatgccttcggtgatggcgaagat
attatcgactataatgaggatgatcctgaagatattgatgatatctacgatgaagattat
gaacttgaagatgacgaagatgaagaagatgatgaattagaaggtctaaccgaaatcgaa
gacgaagatgaagaagatcctgaattgaaagattatgcaggtgatctttctgaatttggt
gacgatgagattgacttagaatcggatacttcttttgaagacgaagatgatgaattcttc
gatgaagaggaagatgagactgaagaagaagtccttccagaggaaagcgaagaagaataa
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