Ignavigranum ruoffiae: M0R79_05855
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Entry
M0R79_05855 CDS
T08083
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
iru
Ignavigranum ruoffiae
Pathway
iru03420
Nucleotide excision repair
iru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
iru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M0R79_05855 (pcrA)
03430 Mismatch repair
M0R79_05855 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iru03400
]
M0R79_05855 (pcrA)
Enzymes [BR:
iru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M0R79_05855 (pcrA)
DNA repair and recombination proteins [BR:
iru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M0R79_05855 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
M0R79_05855 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DUF3553
Motif
Other DBs
NCBI-ProteinID:
UPQ86710
LinkDB
All DBs
Position
complement(1381594..1383882)
Genome browser
AA seq
762 aa
AA seq
DB search
MQSIDRLNAKQKEAVLTTQGPLLIAAGAGSGKTRVLTHRIAYLIEQEAVNPWNILAITFT
NKAANEMKSRIQHLVGPQAESIWVATFHAMCARILRREGHRLGYQTNFSIIDSSEQQTLM
KQIMKRLNLDSQRFNYKNFLAAIDEAKNEGLEPNAYAETVVGYFGDIQATVYKQYQSQLF
QSNAMDFNDLIMLTVKLLTEHEDVREFYQQKFHYIHVDEYQDTNHSQYQLIHLLTGLLRN
VCVVGDADQSIYGWRGANMENILNFEEDYPDAKVILLEQNYRSTQNILNAANSVIANNVH
RKPKKLWSDNPEGPKVHFHMAETDIDEARYVIQQIYQLKEDKGLANQDVAILYRTQAQSR
SLEEQLLKANLPYRIIGGLKFYARKEIQDTLAYLRLIDNEVDNLSFNRIINVPKRGIGQA
TIDKLAEFAQSINLSLFQAISELNHSNLPARTITKLQRFQAMVLRLRQQAEFLTMSELVD
QVWQQSDYIESLRTEGTLEAQNRLENLEEFESVTKQFDEAFSDLEESDPDFKVNGENQDA
NQARPKLTRFLADLSLATDQDDVETADQVTLMTMHAAKGLEFPYVFIVGLEEGLFPLRRA
LESEEELEEERRLAYVGMTRAELVLYLTASRSRLLYGRYQQNLPSRFVDEIDDQYLQKSQ
TNFVERWKMPDERDNQARQSARRVILNPRTSSGNKRARTQSQVTDNDVHWQVGDQVDHRA
WGLGQVKQVVESGGDQLLTISFASQGDKQVLAKFAPIKKVDQ
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtattgaccggttgaatgccaaacagaaagaagccgtcctaaccacccaaggt
cctttgttgatagcggctggggccggatcgggcaagacacgcgtgttgacccatcgcatc
gcttacttaattgaacaagaagcggtcaacccttggaatatattggcgattacctttact
aataaagcggccaacgagatgaaaagccggatccaacacttagtcgggccgcaagccgaa
tcgatttgggtggctactttccacgccatgtgtgctcgaattctgcgtcgagaaggccat
cgcttaggctatcaaacgaatttttcaattattgatagtagtgagcagcaaacattgatg
aaacaaattatgaagcgtttgaatctggacagccaacgatttaactataagaatttctta
gcagcgatcgatgaggctaagaatgaggggttagagccgaatgcttatgctgagacagtt
gtgggttatttcggcgatattcaagccactgtttataagcaatatcaaagtcaactcttt
cagagcaatgcgatggatttcaatgatttgattatgctgacggttaagcttttaactgaa
catgaggatgttcgtgaattctatcaacagaaatttcattatatccacgttgacgaatat
caggataccaaccatagtcagtatcaattgattcacttactcactggtttgcttcggaat
gtctgtgtagtgggcgatgctgatcaaagtatttatggatggcggggcgctaacatggag
aatattctcaactttgaagaggattatcctgatgctaaagtcatcctcttagagcaaaat
tatcgctctacgcaaaatatcctaaatgcagctaactctgtgattgccaacaatgtgcat
cgtaaacctaagaaattatggtcagataatcctgaaggtccgaaagtccacttccatatg
gccgaaacagatattgatgaggcgcgttatgttattcaacaaatttatcagttaaaagaa
gataagggactggctaatcaggatgttgctattctttatcggactcaggcccaatcacgg
agcttggaagaacaacttcttaaggccaacttaccttatcgaattattggaggtcttaaa
ttctacgcgcgtaaagaaattcaagatactctagcatatctacgcttaattgataacgaa
gtagataatctttccttcaaccgaattattaatgtgcctaagcgggggattggtcaagct
acgattgataaattagccgaatttgcccaatcaatcaatctcagcttatttcaggcaata
agcgagctgaatcattccaatctaccagcaagaaccattactaagttacaacgttttcaa
gcgatggttttgcgcttaagacagcaggctgaatttctaaccatgagtgagttggtcgat
caagtctggcaacagagcgattatattgagtctttaagaacagaaggaacgctcgaagct
cagaatcgactagagaacttagaagaattcgaatcggtgaccaagcaatttgatgaagct
tttagtgatttagaggaaagtgatcctgattttaaagttaatggcgaaaatcaggatgcc
aaccaggctcgaccaaagttaacccgtttcttagcggatctttcgttagcaaccgatcag
gacgatgttgaaacagctgaccaagtcactttgatgaccatgcatgcggccaagggctta
gaatttccttatgtctttattgtcggcttagaggagggtctttttccactgaggcgagcg
cttgaaagtgaagaagaacttgaagaagagcgccgattagcctatgtggggatgacccgc
gccgaactagtcttgtatctaaccgcttctcggtcccggctcttatatggtcgctaccaa
caaaatctgcccagtcgcttcgtcgatgaaattgacgaccagtatttacaaaaatcacag
accaactttgtcgaacgctggaagatgcctgatgaacgagacaatcaggcccgacaaagt
gcccgccgggtgattcttaaccctcgaacaagttctggaaataagcgggcccgcactcaa
agtcaagtgaccgataacgatgtgcactggcaagttggtgaccaagttgatcatcgggct
tggggcttaggtcaagtcaagcaagttgttgaatccggtggcgaccaactgctgacgatt
tcctttgccagtcaaggagacaaacaagtcctagccaagttcgctccgattaaaaaagtc
gatcaataa
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integrated database retrieval system
