Ignavigranum ruoffiae: M0R79_06935
Help
Entry
M0R79_06935 CDS
T08083
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K18217
ATP-binding cassette, subfamily B, tetracycline resistant protein
Organism
iru
Ignavigranum ruoffiae
Pathway
iru02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
iru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
M0R79_06935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
iru02000
]
M0R79_06935
01504 Antimicrobial resistance genes [BR:
iru01504
]
M0R79_06935
Transporters [BR:
iru02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
M0R79_06935
Antimicrobial resistance genes [BR:
iru01504
]
Gene variants
Tetracycline resistance genes
Transporters
M0R79_06935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
SMC_N
RsgA_GTPase
AAA_22
MMR_HSR1
KAP_NTPase
AAA_29
AAA_23
AAA_15
Motif
Other DBs
NCBI-ProteinID:
UPQ85383
LinkDB
All DBs
Position
complement(1137726..1139465)
Genome browser
AA seq
579 aa
AA seq
DB search
MKIFIRLIKYIRYRWGQFLIGTILSVASAGLAIYGPMIASRLIDRVADGAKSGQMLSLKA
LWPDLFFYFMIMSVGILLAYASFLILARSSNAISKMIRDQAHQHMQRLPISFFDDKPAGK
ISARIVNDTETLLQNFYMNFMNQILLNLVMVVGTYIALYSVSPQIGLTLLVLLPIIVIWQ
WLYIKWVQPINLKWREIISQQNSQIAEMIHGISIVQLFQRQATVREEFAQTNQAWLKTRY
DQINIETLLSWNFSELLRNLVIFAIMFYLGRQFTEGIFGYSVGTLYLLIEYTTRLFDPIT
MIVRLSSFVQLALAAGTRIFELLDTPLEEDADQEIRVDDGHIRFDSVSFAYNDDWVLQDL
NFEVQPGQTVGLVGHTGSGKSSIINLLFRFYDPQKGQILIDGQAIDQYRRESLRQSMGIV
LQEPYLFSGTIASNVSMNDPEIGPEKVVEALQQVGAIPLIDKLEKGIEEPVVEKGQSLSS
GERQLISFARALACDPKILILDEATSHIDSETEDVIQHAMEVVKAGRTTLIVAHRLSTIQ
QADLILVLDQGRIIERGNHQELLAQGGQYAEMYHMQAQV
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttttataagattaattaaatatatccgttatcgttgggggcagttcttgatt
gggacaatcttgtcagttgcctcagcaggcttagctatttatggaccgatgattgccagt
cgcttaattgaccgcgtagctgatggagccaaaagtggccagatgctatccttgaaagcc
ctctggccagatttattcttttatttcatgattatgagtgtaggtattctgttggcctat
gcttctttcctgattctggcgagatcttctaatgctatttccaagatgattcgcgatcaa
gcccatcaacatatgcagcgattaccgatttctttctttgacgataagcccgcaggtaaa
atttcggcccgaattgttaatgataccgaaactctgttacaaaatttctatatgaatttt
atgaatcaaattcttctaaatttagtcatggtggtgggaacttatattgccctatattca
gtgagtccacaaattggtctgaccctattggtactcttgccgatcattgtcatttggcaa
tggttatatattaagtgggttcagccaattaatttaaaatggcgggagattattagtcaa
caaaatagtcagatagccgagatgattcatggaatttcaattgtccaactctttcaaaga
caagcaacggttcgcgaagaattcgcgcaaacaaatcaagcttggttaaagacacgctat
gaccagattaatattgaaaccttactttcctggaatttttctgagttattaaggaatcta
gtgatttttgccataatgttctatctaggtcggcaatttactgaagggatctttggctat
agtgttgggacactctacttactcattgaatatactacgagattattcgatccgattacc
atgattgtccgtttaagttcctttgtccaactggctttagccgctgggactcgaatcttt
gaattattagatacgccattagaggaagatgctgaccaagaaattagggtagatgacggt
catatccgattcgattcagtttcattcgcctataacgacgattgggtcttacaagattta
aactttgaggttcagcccgggcaaaccgtgggtttagtgggccataccggttcaggcaag
tcttcaattattaacttactctttcgcttttatgatccgcaaaagggtcagattctaatt
gatggacaagcgattgatcaatatcgtcgtgagagtttacgtcaatcgatggggattgtc
ttgcaagagccttatttattctcaggaacgattgcttctaatgtctcaatgaacgatcca
gaaattggtcctgagaaagttgtagaagccctccaacaggtgggggcgattcctttaatt
gataaattggagaaggggattgaagagccagtcgttgaaaagggccaaagcctatcctca
ggagaacgtcaattgatttcatttgcgcgagcgctagcctgtgatcctaagattctaatc
ttggatgaagcgacttctcatattgattcggaaacggaagatgtgattcaacacgcgatg
gaagtagtgaaggcgggccggacgaccttgattgtggctcaccgcttatcaacgattcaa
caagcagatttaatcctggtcttagaccaaggtcgaattattgagcggggcaaccatcaa
gaattattggcacaaggtggccaatatgctgagatgtatcacatgcaggctcaggtataa
DBGET
integrated database retrieval system
