Ignavigranum ruoffiae: M0R79_07440
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Entry
M0R79_07440 CDS
T08083
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
iru
Ignavigranum ruoffiae
Brite
KEGG Orthology (KO) [BR:
iru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iru03016
]
M0R79_07440 (truB)
Enzymes [BR:
iru01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
M0R79_07440 (truB)
Transfer RNA biogenesis [BR:
iru03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M0R79_07440 (truB)
Prokaryotic type
M0R79_07440 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF6210
Motif
Other DBs
NCBI-ProteinID:
UPQ85476
LinkDB
All DBs
Position
complement(1033337..1034248)
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AA seq
303 aa
AA seq
DB search
MLDGILVVWKEAGMTSHDVIFKLRKILKMKKIGHTGTLDPEVEGVLVVCLGQATKLVEFL
MSGHKIYQGEVTLGWSTETEDQTGELVERKPVLQALDESLVDSVMATFKGKITQTPPYYS
AVKVNGRKLYEYARQGMKVERPQRQIEIYQLNRLSPIKYDAASQSCSWKFAVECSKGTFV
RTLAVDIGRALGYPAHMSALERLASSGYHDQQALTLAEIEQVYREGRIEEYIQPIETALT
EFPQLTISEHDYELVKHGSVLPADYFGSLIDQPCCLIYQDRLVAMYYGHPQRPGWIKPRK
MFR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgttagatggaatattagtcgtctggaaagaagccggtatgaccagtcatgatgtcatc
tttaaattaagaaaaattctaaaaatgaaaaaaatcggccatacaggtactctagatccg
gaagttgaaggggtcctagtagtctgtttaggtcaagcgacgaagctggttgaatttctg
atgtctggtcacaaaatttatcaaggggaagtgacgctaggttggtcaaccgagacggaa
gatcaaactggcgagctcgttgaaagaaaacctgtcttgcaagcacttgatgagtcgctg
gttgattcagttatggcgacatttaaagggaagataacccaaacccctccttattattcg
gcagttaaagtgaacggacgcaagttatatgaatatgcacgtcaaggtatgaaagtggaa
cgaccgcaacgccagattgagatatatcaactcaatcgattgagtccaattaagtatgat
gcggccagccaatcctgttcctggaaatttgccgttgagtgcagtaagggaacttttgtc
cgtaccttggcggttgatattggtcgcgcgctcggttatccagctcatatgtcggccttg
gagcgcttagcgagttcaggctatcatgaccaacaagcattaactttagctgaaattgaa
caagtctaccgagaggggcgaattgaagaatatatccaaccgattgaaacagctttgact
gagttccctcaactgacgattagtgaacatgattatgaattagtgaaacacggtagtgtc
ttaccggctgactattttggttctttgattgatcaaccctgttgtttaatctaccaagac
cgcctagtagcaatgtattatggccatcctcaacgaccaggatggattaaaccacgaaaa
atgtttcgatag
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