Ignavigranum ruoffiae: M0R79_08040
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Entry
M0R79_08040 CDS
T08083
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
iru
Ignavigranum ruoffiae
Brite
KEGG Orthology (KO) [BR:
iru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iru03032
]
M0R79_08040
03036 Chromosome and associated proteins [BR:
iru03036
]
M0R79_08040
03400 DNA repair and recombination proteins [BR:
iru03400
]
M0R79_08040
DNA replication proteins [BR:
iru03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
M0R79_08040
Chromosome and associated proteins [BR:
iru03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
M0R79_08040
DNA repair and recombination proteins [BR:
iru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
M0R79_08040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HTH_15
IF-2
DUF7357
ROS_MUCR
Motif
Other DBs
NCBI-ProteinID:
UPQ85594
LinkDB
All DBs
Position
893514..893789
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AA seq
91 aa
AA seq
DB search
MANKAELVEKVASKTNLTKKDVTATVEALFQSIEEILADGDKVQIIGFGTFEVRERAARK
GRNPQTGEEIKIKATRVPGFKAGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaagcagaattagtagaaaaagttgcaagcaaaaccaatttaacgaagaaa
gatgtgactgcaactgttgaggccttattccaatctattgaagaaattctagctgatggg
gataaagttcaaattattggcttcggtactttcgaagtacgtgaaagagcagcgcgtaaa
ggacgtaacccacaaactggggaagaaattaagatcaaagcaacccgtgttcctggattc
aaagcagggaaagctttaaaagacgctgttaaataa
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