Ignavigranum ruoffiae: M0R79_08120
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Entry
M0R79_08120 CDS
T08083
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
iru
Ignavigranum ruoffiae
Pathway
iru03030
DNA replication
iru03430
Mismatch repair
iru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
iru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M0R79_08120
03430 Mismatch repair
M0R79_08120
03440 Homologous recombination
M0R79_08120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iru03032
]
M0R79_08120
03400 DNA repair and recombination proteins [BR:
iru03400
]
M0R79_08120
Enzymes [BR:
iru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M0R79_08120
DNA replication proteins [BR:
iru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M0R79_08120
DNA repair and recombination proteins [BR:
iru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M0R79_08120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UPQ85607
LinkDB
All DBs
Position
875286..878624
Genome browser
AA seq
1112 aa
AA seq
DB search
MLLNVQTVYSLLHSTLTIEDYVDQAKQLNYQAIGIADENVLHGCYQFYQLAQAHSLKPLI
GMKVTLAGLIDTMHTYSFLLYAKNYQGYLDLIILSKHLNQEPIDSNSIYQLLEQFSNDLI
MIHLGKESELIQALIQTDQNYCQKIFNAWQQIMGQNMYLSLSVRPYNNIEAQHIIDFAQT
TGLKIVIGQKVHSLKAEDASSLTILQAIDEGTSLNSADLPYEGPHYLYSAEELEQLYQQM
GYSAIIQNTQTLINQLNVQLPDKQNYLPKFPHPQHETAAELLNELTFQALKEKGLDQKID
YVERLEYELQVIDRMGFSDYFLIVGDFIEYCRRVKIRVGPGRGSSAGSLVAYLLQITLVD
PIEYDLLFERFLNPERHSMPDIDIDIPDNQRQRVIHYVQDKYGADCVAQVITFGTFGAKL
SIRDTLRVLNYDQDTLTTWSKLIPSDQNQPMTLTRAYQESHRFRNFVEESTHHQQIFKIA
QTIEGLPRNTSTHAAAIVIHDQALETILPVFAKSHQILQTQYTMYDVEAIGLLKMDFLGL
RNLTLLDDILNTVQVNYQNNLDINQITLSDPSTLKIFQNADTSGVFQFESIGIRRVLQKV
HPESFEDIVAVIALYRPGPMKQIDHFVARKQGKAPITYLHPKLEPILSKTYGIIVYQEQV
MQMVRVMAGYSLGEADILRRAMSKKDKNLMDLEENHFIKGAKAQGFTEKEAQEVFSYILA
FANYGFNRSHAVVYSLLAYQLAYLKCHYPIEFYACLLRSGNDTNYLSYIQEAKLRLGRIQ
APDINQSLTDTVAGQEQLLLGLNNIKGLRQDFIADILSDRSNLGPYRSFEDFLRRLSSKY
LKVDYLEPLILTGAFDQLGYNRATLYNNLSKFIQVIEFTGNNLSLFKEMEPTIDPYPEFS
KQERQEYERAYLGFTLDPHPLSQYEQWMRAYSQYTTVAEIGQKDLGQLIESIVVIQEMKV
IRTKRNELMAFAQVGNDIQSYAMVIFPDKYKQYGDQLKEGQLIHFRARLDLDRRQERQLV
LDQVVPLPNLKQIQDQQVFCFIKINDVNQDQALIEEIKSFIQAHKGPHPVILVDQKHRTY
QLTDKFQIDVSTQVIDAFKHQFPQLQIASKSL
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgttattaaatgttcaaacggtatactcattattacattctaccttaaccattgaagat
tatgtcgaccaagccaagcagttaaactaccaagccatcggtattgctgatgagaacgtg
ttgcatggctgttatcagttttatcaattagctcaagcccattctttaaagcccttaatc
ggtatgaaagtgacacttgctggtttgatagataccatgcacacatattcattcttactt
tatgctaaaaactatcaaggatatttagacttgataattttatccaaacacctaaatcaa
gaaccgattgattcaaactcaatttatcagctgcttgaacaattctccaacgatctgatc
atgattcacttgggcaaggagagtgaattaatccaagcgctgattcaaacagaccaaaat
tattgtcaaaagatcttcaatgcttggcagcagattatggggcagaatatgtaccttagc
ttgagtgtccgtccttataataatattgaggcacaacacatcattgattttgcccaaaca
acgggactcaagattgtgattggtcaaaaggttcatagtctaaaagctgaggatgccagt
agtttgacgattctccaagctattgatgagggcactagcttaaattctgccgatttacct
tatgaaggtcctcattatctctattcagccgaggaacttgaacaattataccaacagatg
ggttattcagcgattatccaaaatactcaaacattaatcaatcaacttaacgttcaactt
ccggataaacagaattatctaccaaaatttccccacccacagcatgagacggctgctgaa
ttactcaatgaacttacttttcaagctttgaaagaaaagggattggatcaaaaaatagat
tatgttgaacgtttggaatatgaacttcaagtgattgatcgtatgggtttttcagattat
tttttaattgtgggagactttatcgaatattgtcgccgagtcaagatacgcgtgggtcct
ggtcggggatcttcggctggatctttagtggcttatttattacaaatcactttagttgat
ccgattgaatatgatttgttatttgagcgttttttaaatcctgaacgtcattcgatgccc
gacattgatattgatattcctgataatcaacgacaacgggtcattcattatgttcaagac
aaatatggtgcagattgtgtggctcaagtcattaccttcggaacttttggagctaagcta
tctattcgtgataccttacgggtcttgaactacgatcaagatactctgacgacttggtcg
aaattaattccttctgatcaaaatcagcccatgacgttaacacgggcctatcaagaatca
catcgcttccgcaattttgtcgaagaatccactcatcatcaacaaattttcaagattgct
caaacgatagaaggtttgccgcgcaatacttcgacacatgctgcagccattgtgattcac
gatcaagccttggaaacgattctgcctgtgtttgccaagtcgcatcaaattctacaaaca
caatataccatgtacgatgtggaagccattggcctattaaagatggactttttaggtttg
agaaacctgaccttattagacgatatcctgaatacggtacaagtcaattatcagaataat
ttagacattaatcagattacattatcggatccctctactttaaagatttttcagaatgca
gatactagtggagtgtttcaatttgaatctatcggtattcgaagagttttacagaaagtt
catcccgaaagctttgaagatattgtagcggtgatcgccttataccgacctggtccgatg
aaacaaattgatcacttcgtggcgcgcaagcaaggcaaagcgccgataacttatctccat
cctaaacttgaacccatcctaagtaagacctatggcattattgtttatcaagaacaggta
atgcagatggttcgggtcatggctggttatagtctaggtgaagctgacattctccgacga
gccatgagtaaaaaagataaaaacttgatggatcttgaagaaaatcactttataaagggg
gctaaagcccaaggctttactgaaaaagaagctcaagaagtcttctcttatattttagcg
tttgcaaattatgggtttaaccggtcccatgccgtcgtctattcgctcttggcctatcag
ttagcttacttaaaatgtcattatccgattgaattttatgcgtgtctgctccgttcaggc
aatgatacaaattatttatcctatattcaggaagctaagttaagactagggcggatccaa
gcgcccgatattaatcaaagtttgacggatacggtcgctggccaggagcaactcttactt
ggtttgaataatattaaaggcttacgccaggatttcatcgctgatattttgtccgatcgt
tcgaacttgggaccttatcggtcttttgaagattttctacgtcgtctttcaagtaaatat
ttgaaagtagattatctggaacctttaattctgaccggagcttttgatcagttgggttat
aatcgagcaactctatataataacttaagcaaatttattcaggtgattgagtttaccggt
aataatctaagtttattcaaggaaatggaacccacgattgatccttatccggagttctct
aaacaagagcgacaagagtatgaacgggcttacttaggatttacattggatccccatccg
ttgtcccaatatgagcagtggatgcgagcgtactcacaatatactacagtagcagaaatc
ggtcaaaaagacttgggtcaactgattgaaagtattgtggtcattcaagaaatgaaagtg
attcgtaccaaacgtaatgaattaatggcttttgcccaagtcggcaatgacatccaaagt
tatgccatggtgatctttcctgataagtacaagcaatatggtgatcaactgaaagagggg
cagttaattcattttagagcccgtcttgatttagatcgacgtcaggagagacaattagtc
ttagaccaagtcgtccctttaccaaatctcaaacaaatacaagatcaacaagttttctgc
tttattaagatcaatgatgtcaatcaagatcaagcattaatcgaagaaatcaaaagtttt
attcaagctcataaaggcccacatcctgttattttggtcgatcaaaaacatcgaacatat
caattaactgacaaattccaaattgatgttagtacgcaggtcatagatgcctttaaacac
caatttcctcagttacagattgcgagcaaaagcttataa
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