Ignavigranum ruoffiae: M0R79_08155
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Entry
M0R79_08155 CDS
T08083
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
iru
Ignavigranum ruoffiae
Pathway
iru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
iru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M0R79_08155 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iru03019
]
M0R79_08155 (rny)
Messenger RNA biogenesis [BR:
iru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M0R79_08155 (rny)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF3149
UPF0154
Motif
Other DBs
NCBI-ProteinID:
UPQ85613
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Position
865941..867500
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AA seq
519 aa
AA seq
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MDLQSIAFVIVALIIGCVVGYFIRKISDEKQVNGAKANAEAIVSDAIKQAQILKREALFE
AKEENLKYRNEVENELKDRRNEVVKNESRLNQKEDNLDQRSNLLDQRELNLENKEQDYRQ
RQEQMVEHESEIEKLLEEQKTELERVAAMSRDQAKSQILAETEQELSQEIAIMVRQAEDQ
ARDESNRKAKQLLLQAMQRTSTDVVTDNSVSVVSLPNDDMKGRIIGREGRNIRTFESMTG
IDLIIDDTPETVVLSGFDPIRRQIAKTALEKLIQDGRIHPARIEEMVERSRKELDERIRE
YGEEATFELGIHSLHPDLIKVIGRLAYRTSYGQNVLKHSIEVAKLSGFIAGEFGEDVQLA
KRAGLLHDLGKALDHEIEGTHVEIGAEIAKRYHEPEIVINSIASHHGDVQPSSTIAVIVA
TADALSAARPGARSESLENYIRRLEQLEEISNSFDGVSHSYAIQAGREVRVIVQPDQIND
AQASKLARNVRKRIETEMTYPGNIKVTVIRETRAVEVAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggacttacagtcaatcgccttcgtaatcgttgctttaataatcggatgtgttgttgga
tatttcattcgtaaaatttcagatgagaaacaagtcaatggtgctaaagccaacgctgaa
gcaatcgtatctgatgcgattaaacaggcccagattttaaaaagggaagcattgtttgaa
gcgaaggaagaaaacttaaagtaccgtaatgaagtagagaatgagttaaaagatcgacgc
aatgaagtagtaaaaaatgaaagtcggttaaatcaaaaagaagataatctagatcaacgc
agtaacttgctcgatcaaagagaattaaatctcgagaataaagaacaagattatcgtcaa
cgtcaagaacaaatggtagaacatgaatctgagatagaaaaattgcttgaagagcaaaaa
acggaattagaacgtgttgcagccatgtctcgtgatcaagctaaatctcaaattttagcc
gagaccgagcaagaattatctcaagagattgctatcatggttcgccaagctgaagatcag
gccagagacgaatctaaccgaaaagcaaaacagttattactccaagcgatgcagcggacg
tcgacggatgtagtcacggataattcagtcagtgtcgtgtcattaccgaatgatgatatg
aaaggtcgaattattggtcgggaaggacgcaatattcgcacctttgaatcaatgaccggg
attgacttaattatcgatgatacgcctgaaaccgtcgttttaagtggatttgatccaatt
cgtcgtcaaattgccaagacggccttggagaaattaattcaagatggcaggattcatccg
gctagaattgaagaaatggtcgaacgttctcgcaaagaacttgatgaacgcattcgggag
tatggggaagaagctacctttgaactgggtattcactcactccatcctgatctgattaaa
gtcattggtcgcttagcttatcgaacaagttatggtcaaaatgtcttaaaacatagtatt
gaagttgctaaattatccggctttattgcaggggaatttggtgaagatgttcaattagct
aaacgtgccggcttattacatgacttaggtaaagccttagatcatgagattgaagggact
cacgttgaaattggggcagagattgccaaacgctatcatgaaccagagattgtaattaat
tcgattgcttctcaccatggtgacgtacaacctagctcaaccattgctgtcattgtagca
actgctgatgctttatcagctgctcgccctggtgcacgtagcgaatcattagaaaattat
attcgtcgtctagaacaactcgaagaaatttctaatagttttgatggggtatcgcactct
tatgcgatccaagctgggcgcgaagtgagagtgattgttcaacctgatcaaattaacgat
gcccaagcttctaaattggcccgtaatgttcgaaaacgtatcgagaccgaaatgacatat
cctggaaatattaaagtaacggttattcgcgaaacgagagccgttgaagtcgcaaaataa
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