Ignavigranum ruoffiae: M0R79_08415
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Entry
M0R79_08415 CDS
T08083
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
iru
Ignavigranum ruoffiae
Brite
KEGG Orthology (KO) [BR:
iru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iru03016
]
M0R79_08415 (rnz)
Enzymes [BR:
iru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
M0R79_08415 (rnz)
Transfer RNA biogenesis [BR:
iru03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
M0R79_08415 (rnz)
Prokaryotic type
M0R79_08415 (rnz)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
CENP-X
Motif
Other DBs
NCBI-ProteinID:
UPQ85660
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All DBs
Position
806481..807410
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AA seq
309 aa
AA seq
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MELLFLGTGAGLPSKGRNVSSLALKLLDELNEIWLFDCGEATQHQILKTSLKPRKIRKVF
ISHLHGDHIFGLPGFLSSRSFQIAEREDLTVFGPPGLRNYIQSSLKFSKSKLLYPLKIVE
LDPQGGKLQLNGHWTMEYLPLDHGTLSFGFRVIEPDQPGQLLMDKLAKYQVPNGPLLGQL
KQGKQVQLPDGQILDGKDFIGPKKAGRIVTILGDSRPCSNSVILAKQADCLVHEATHRAN
EHKMAHQYHHSTSQQAANIAKQAQVKHLLLNHISARYLGQDIQQLQAEAGKTFASVKVVN
DFDQISIKG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaacttttatttttaggaactggagccggacttcctagtaagggaagaaatgtcagc
tcacttgccttgaaactattagatgaattaaatgagatttggttatttgattgtggtgaa
gcaacccaacatcaaatcttaaagacgagtctaaaacctcgtaaaattcgtaaagttttt
attagtcatctccatggagatcatatctttgggctgcctggtttcttatctagtcggtct
tttcaaatagctgaacgagaagacttgacagtatttggtccgccaggcttaagaaattat
attcaatcgagtttgaaattctcaaaaagcaaactcttgtatcctttgaaaatagtcgag
cttgatcctcaagggggtaaacttcaactcaatggtcactggacgatggaatatttacca
ctggatcatggtactttatcttttgggtttagagtcattgaaccagatcaaccagggcaa
ctattaatggataagttagctaagtatcaggtgccaaatggacctctattgggccaactc
aagcaaggaaagcaagttcagctgccagatggtcaaatccttgatggtaaggattttatt
ggaccgaaaaaagcggggcggattgtaacaattctaggcgacagtcgtccttgttctaac
agtgtcattctagctaagcaggcagattgcttggtacatgaagcgacacatcgtgccaat
gaacataaaatggctcatcaatatcatcattctactagccaacaagctgcgaatattgcc
aaacaagcacaagtgaaacatttattactcaaccatatttccgcccgttatttaggtcaa
gatattcaacaattacaggctgaagctggaaagacattcgcttcggtcaaagtggtgaac
gatttcgaccagatttcaatcaaaggatag
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