Ixodes scapularis (black-legged tick): 115308176
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Entry
115308176 CDS
T01131
Name
(RefSeq) cleavage stimulation factor subunit 3 isoform X3
KO
K14408
cleavage stimulation factor subunit 3
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115308176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
isc03019
]
115308176
Messenger RNA biogenesis [BR:
isc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
115308176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
Motif
Other DBs
NCBI-GeneID:
115308176
NCBI-ProteinID:
XP_029836836
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MFAGGGKREATANMALMEGYIPDRVKNAEKRLEQNVYDIEAWSILLRDAQNKKMEDARPL
YEKIVTQFPNAGRYWKIYIEHEMKSRNFERVEKLFQRCLMKVLNIDLWRCYLTYVKETKG
ALPTFREKMAQAYDFALDKMGMDILSFPVWNDYINFLKSVEAVGSYAENQRITAVRKVYQ
RGIVNPMMNIEQLWKEYINYEQGINLLIAEKMISDRSREYMNARRVAKEYEAVTRGLNKN
SPSVPPQGTPEEAKQVELWKKYISWEKGNPLRTEDHALITKRVMFAYEQCLLCLGHHPDV
WYEAALFLEQSSKLLTDKGDLNAGKLFSDEAAAVYERATTTLLRKNTLLYFAYADFEESR
MKHDKVHQIYNKFIEIPDIDPTLAYIQYMKFARRAEGIKAARIVFKKGREDARTSHQVYV
AAALMEYYCSKEKTVAFKIFELGLKKYGDNSDYILAYVDYLSHLNEDNNTRVLFERVLTS
GSLPPEKSVEIWNRFLEFESNIGDLSSILKVEKRRAATIEKMILDHPGKLKEFEGKETAL
LVDRYRFMDLYPCSSQELKSLGYRELTRQQVTSAPTLKRETTQENATDQKVFVYPRPDTG
QMIPFKPKQICPTGAHLVAGGVFPPPPAASELMMRLPPPMCFMGPFVGVDELMDLFRNLN
LPDKPPRPSENGVSKDHLKLFEHGTAASQQGGANQGGGVKRKHRADAAAPAPGGAPAEDS
EGEEGGLVPPAHDLYRLRQQKKLMF
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctggcggtggtaaacgcgaagccacagcaaacatggctttaatggaggggtac
ataccagacagggtgaaaaatgcggagaagcgactggagcagaacgtctacgacatcgag
gcgtggagtattctgcttcgcgatgcccagaacaaaaagatggaggacgcccgacccctg
tacgagaagattgtcacccagtttcccaacgcaggccgctactggaagatatacattgag
cacgagatgaaatcgaggaacttcgagagagttgaaaagctgttccagagatgcctgatg
aaggtgctcaacatcgacctctggcgctgctacctgacatacgtgaaggagaccaagggt
gccctccccaccttcagggaaaagatggcccaggcgtacgactttgccctggacaagatg
ggcatggacatcctctcgtttcctgtctggaacgactacatcaacttcctcaagagcgtg
gaggcggtgggttcgtacgcggagaaccagcgcatcacggcggtccgcaaggtgtaccag
cgtggcattgtcaaccccatgatgaacatcgagcagctctggaaggagtacatcaactac
gaacagggcatcaacctgctgattgcggagaagatgatctcggaccggagccgggagtac
atgaacgctcgccgggtggcaaaggagtatgaggccgtaacgcgcggcctcaacaagaac
tcgccctcggtgccgcctcagggcacgcccgaggaggccaaacaggtggagctgtggaag
aagtacatctcctgggagaaggggaacccgcttcgcacagaagaccacgccctcatcacg
aaacgagtgatgtttgcgtacgagcagtgcctgctctgcctggggcaccacccggacgtg
tggtacgaggcagcgctgttcctcgagcagtcgagcaagctgctcacggacaagggggac
ctcaacgcggggaagctgttctcggacgaggccgcggcggtctacgagcgtgcaaccacc
acgctactccgcaagaacaccctgctctacttcgcctacgccgacttcgaagagagccgg
atgaagcacgacaaggtgcaccagatctacaacaagttcatcgagatccccgacatcgac
cccactttggcctacatccagtacatgaagtttgcacggcgagcggaaggtatcaaggcg
gcccggatcgtcttcaagaagggcagggaggacgcccgcaccagccaccaggtgtacgtg
gcagcggcgctcatggagtactactgcagcaaggagaaaactgtggccttcaagattttt
gaactgggtctgaagaagtatggcgacaactcggactacatcttggcatacgtcgactac
ctgtcgcacctcaacgaggacaacaacaccagggtcctgtttgagcgagtcctgacctca
ggctccctgcctccggagaagtcagtcgaaatctggaacaggttcctggagtttgagtcc
aacatcggcgacctctcgagcatcctcaaggtcgagaagcggagggcggccaccatcgag
aagatgattctcgatcaccccgggaagctgaaggaattcgagggcaaggagacggcacta
ctggtggaccggtaccggttcatggacctctacccctgcagctcccaggagctcaagtcc
ctcggatatcgggaactgacgaggcagcaggtgacatctgccccgaccttgaagcgggaa
acgacgcaggagaatgccaccgaccagaaggtgtttgtgtacccgcgtcctgacacgggg
cagatgataccgttcaagcccaagcagatctgcccaacgggagcgcacctggttgccgga
ggagtatttcctcctccccccgccgcttcggagctgatgatgcgcctgcctcctccaatg
tgcttcatgggccccttcgtgggagttgacgagctcatggacctcttcaggaatctcaac
ctcccagacaaaccgccccggcccagtgaaaacggcgtctctaaggaccacctgaagctg
ttcgaacacggcacggcggcgtcgcagcagggcggggccaaccaggggggcggagtcaag
cggaagcaccgggcggacgccgccgcaccggctccgggtggtgccccggctgaggacagc
gagggagaggagggggggctagtgccgcccgcccacgacctctaccgcctgcgccagcag
aaaaagctcatgttttag
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integrated database retrieval system
