Ixodes scapularis (black-legged tick): 115314225
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Entry
115314225 CDS
T01131
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc03018
RNA degradation
isc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115314225
09123 Folding, sorting and degradation
03018 RNA degradation
115314225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
isc03019
]
115314225
03041 Spliceosome [BR:
isc03041
]
115314225
Messenger RNA biogenesis [BR:
isc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115314225
mRNA degradation factors
5'-3' decay
Lsm complex
115314225
Spliceosome [BR:
isc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
115314225
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
KOW7_SPT5
Motif
Other DBs
NCBI-GeneID:
115314225
NCBI-ProteinID:
XP_029829158
LinkDB
All DBs
Position
Unknown
AA seq
90 aa
AA seq
DB search
MSLPPVNPSSLLPLELIDKCIGSKIHIIMKSDKEIVGTLLGFDDFVNMVLEDVTEYESTP
EGRRITKLDQILLNGNNITMMVPGGDMPDA
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcctccagtcaacccttcgagcttgctgccactagaactgatcgacaagtgt
atcgggtcgaagattcatattatcatgaagagcgacaaggaaatcgtcggaacactcttg
ggattcgacgacttcgtcaatatggtacttgaagatgtgacggaatatgagagcactcct
gaagggagaagaatcaccaagcttgatcagattctccttaatggaaacaacataacaatg
atggtccctggaggtgatatgcctgatgcataa
DBGET
integrated database retrieval system
